RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 MRPL36Q9P0J6 103 aaKnown RBP15.39■□□□□ 0.05
SSU72-204ENST00000378726 TRAV9-1A0A075B6T8 112 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 MT-CO2P00403 227 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 RPLP1P05386 114 aaKnown RBP15.39■□□□□ 0.05
SSU72-204ENST00000378726 GAGE1Q13065 139 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 TMEM208Q9BTX3 173 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 GOLT1BQ9Y3E0 138 aa15.39■□□□□ 0.05
SSU72-204ENST00000378726 CENPEQ02224 2701 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 ABCA2Q9BZC7 2435 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 DLEU1O43261 78 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 TOMM20LQ6UXN7 152 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 FAM103A1Q9BTL3 118 aaKnown RBP15.38■□□□□ 0.05
SSU72-204ENST00000378726 WNT10AQ9GZT5 417 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 V9GYV3 84 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 CSMD2Q7Z408 3487 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 CHD6Q8TD26 2715 aa15.38■□□□□ 0.05
SSU72-204ENST00000378726 IGHV3OR16-10A0A075B7F0 116 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 CRYGCP07315 174 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 PAFAH1B2P68402 229 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 RPEL1Q2QD12 228 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 ZNF562Q6V9R5 426 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 HSPB9Q9BQS6 159 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 CBY1Q9Y3M2 126 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 LY96Q9Y6Y9 160 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 FBN2P35556 2912 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 CORTO00230 105 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 ESDP10768 282 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 KRTAP10-9P60411 292 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 CX3CL1P78423 397 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 RUSC1-AS1Q66K80 236 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 ZNF705AQ6ZN79 300 aaPredicted RBP15.37■□□□□ 0.05
SSU72-204ENST00000378726 CELSR2Q9HCU4 2923 aa15.37■□□□□ 0.05
SSU72-204ENST00000378726 IGHV3-21A0A0B4J1V1 117 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 SNURFLB1AK76 121 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 MSMBP08118 114 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 CRYBB3P26998 211 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 CENPWQ5EE01 88 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 OR8I2Q8N0Y5 310 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 SLC25A16P16260 332 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 BAGE3Q86Y29 109 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 BAGE2Q86Y30 109 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 THAP8Q8NA92 274 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 C1RLQ9NZP8 487 aa15.36■□□□□ 0.05
SSU72-204ENST00000378726 USP9YO00507 2555 aaPredicted RBP15.36■□□□□ 0.05
SSU72-204ENST00000378726 IGKV1D-37A0A075B6S9 117 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 IGHV1-69DA0A0B4J2H0 117 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 SPINK4O60575 86 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 IGHV1-69P01742 117 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 ZNF503Q96F45 646 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 C7orf69Q9H7B7 122 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 CSMD1Q96PZ7 3565 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 TCRBV4S1A1TA0A5B7 111 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 HELTA6NFD8 242 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 B4DSR2 109 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 TEX43Q6ZNM6 134 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 PQLC2Q6ZP29 291 aa15.35■□□□□ 0.05
SSU72-204ENST00000378726 GNG4P50150 75 aa15.34■□□□□ 0.05
SSU72-204ENST00000378726 RANP62826 216 aaKnown RBP15.34■□□□□ 0.05
SSU72-204ENST00000378726 Q8N9W7 124 aa15.34■□□□□ 0.05
SSU72-204ENST00000378726 TMEM116Q8NCL8 245 aa15.34■□□□□ 0.05
SSU72-204ENST00000378726 C22orf15Q8WYQ4 148 aa15.34■□□□□ 0.05
SSU72-204ENST00000378726 RNASE7Q9H1E1 156 aaKnown RBP15.34■□□□□ 0.05
SSU72-204ENST00000378726 TRAV40A0A0B4J280 105 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 LINC00614P0C842 121 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 Q0VG73 95 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 BRD3OSQ6XYD6 125 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 OR5AU1Q8NGC0 362 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 ARPC1AQ92747 370 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 C20orf144Q9BQM9 153 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 MIEN1Q9BRT3 115 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 C19orf24Q9BVV8 132 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 TNFRSF19Q9NS68 423 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 POLQO75417 2590 aa15.33■□□□□ 0.05
SSU72-204ENST00000378726 HIF1ANQ9NWT6 349 aa15.33■□□□□ 0.04
SSU72-204ENST00000378726 RNF114Q9Y508 228 aa15.33■□□□□ 0.04
SSU72-204ENST00000378726 PTPN13Q12923 2485 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 VN1R17PQ8TDU5 208 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 GNB1LQ9BYB4 327 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 GNB4Q9HAV0 340 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 TMEM167BQ9NRX6 74 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 PAM16Q9Y3D7 125 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 ABCA1O95477 2261 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 I3L2K1 104 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 SLC35B1P78383 322 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 NDPQ00604 133 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 RASL11BQ9BPW5 248 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 SAMD10Q9BYL1 202 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 DNAJC4Q9NNZ3 241 aa15.32■□□□□ 0.04
SSU72-204ENST00000378726 KMT2BQ9UMN6 2715 aaPredicted RBP15.31■□□□□ 0.04
SSU72-204ENST00000378726 NPSP0C0P6 89 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 IGHV4-38-2P0DP08 117 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 KIAA1644Q3SXP7 199 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 ASPHD1Q5U4P2 390 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 TECRQ9NZ01 308 aaKnown RBP15.31■□□□□ 0.04
SSU72-204ENST00000378726 ANKRD17O75179 2603 aaKnown RBP15.31■□□□□ 0.04
SSU72-204ENST00000378726 IGHV7-81A0A0B4J1V7 117 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 GGTLC3B5MD39 225 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 OR7C2O60412 319 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 OR5G3P0C626 314 aa15.31■□□□□ 0.04
SSU72-204ENST00000378726 OR10J4P0C629 311 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms