RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TMEM190Q8WZ59 177 aa14.46□□□□□ -0.09
TDP2-202ENST00000378198 RASL11BQ9BPW5 248 aa14.46□□□□□ -0.09
TDP2-202ENST00000378198 SLC25A39Q9BZJ4 359 aaPredicted RBP14.46□□□□□ -0.09
TDP2-202ENST00000378198 BOD1L1Q8NFC6 3051 aa14.46□□□□□ -0.09
TDP2-202ENST00000378198 LY6LH3BQJ8 138 aa14.46□□□□□ -0.09
TDP2-202ENST00000378198 GPR6P46095 362 aaPredicted RBP14.46□□□□□ -0.09
TDP2-202ENST00000378198 PLGLAQ15195 96 aa14.46□□□□□ -0.09
TDP2-202ENST00000378198 PMCHL1Q16048 86 aa14.46□□□□□ -0.09
TDP2-202ENST00000378198 FAM231BA6NCW3 169 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 H3BTX0 84 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 M0R2Z0 102 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 MUC15Q8N387 334 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 WNT10AQ9GZT5 417 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 UQCR10Q9UDW1 63 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 DMXL1Q9Y485 3027 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 KLHDC1Q8N7A1 406 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 OR2D3Q8NGH3 330 aa14.45□□□□□ -0.1
TDP2-202ENST00000378198 FAM181BA6NEQ2 426 aa14.44□□□□□ -0.1
TDP2-202ENST00000378198 RNASEKQ6P5S7 137 aaKnown RBP14.44□□□□□ -0.1
TDP2-202ENST00000378198 Q86TA4 180 aa14.44□□□□□ -0.1
TDP2-202ENST00000378198 GTSF1Q8WW33 167 aa14.44□□□□□ -0.1
TDP2-202ENST00000378198 ROS1P08922 2347 aa14.44□□□□□ -0.1
TDP2-202ENST00000378198 TRBV6-1A0A0K0K1D8 114 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 NPIPB6E9PJ23 425 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 IGLC2P0DOY2 106 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 IGLC3P0DOY3 106 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 RBPMS2Q6ZRY4 209 aaKnown RBP14.43□□□□□ -0.1
TDP2-202ENST00000378198 OR8B3Q8NGG8 313 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 LINC01560Q8TB33 94 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 OR8B2Q96RD0 313 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 RNF24Q9Y225 148 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 RP1L1Q8IWN7 2480 aaPredicted RBP14.43□□□□□ -0.1
TDP2-202ENST00000378198 PCNX1Q96RV3 2341 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 LIPFP07098 398 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 ZNF25P17030 456 aaPredicted RBP14.43□□□□□ -0.1
TDP2-202ENST00000378198 PGLYRP4Q96LB8 373 aa14.43□□□□□ -0.1
TDP2-202ENST00000378198 K7ENP7 123 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 CNIH1O95406 144 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 BTF3P20290 206 aaKnown RBP14.42□□□□□ -0.1
TDP2-202ENST00000378198 G0S2P27469 103 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 ZNF672Q499Z4 452 aaPredicted RBP14.42□□□□□ -0.1
TDP2-202ENST00000378198 SCNM1Q9BWG6 230 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 PKDREJQ9NTG1 2253 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 IGKV1-17P01599 117 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 HOXB4P17483 251 aaPredicted RBP14.42□□□□□ -0.1
TDP2-202ENST00000378198 COL8A1P27658 744 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 ZNF124Q15973 351 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 LY6G5BQ8NDX9 201 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 ONECUT1Q9UBC0 465 aa14.42□□□□□ -0.1
TDP2-202ENST00000378198 IGLV2-11P01706 119 aa14.41□□□□□ -0.1
TDP2-202ENST00000378198 EBLN2Q6P2I7 272 aa14.41□□□□□ -0.1
TDP2-202ENST00000378198 BPIFA4PQ86YQ2 179 aa14.41□□□□□ -0.1
TDP2-202ENST00000378198 K7EIM0 57 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 TIMM23O14925 209 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 HTR1DP28221 377 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 GOLT1AQ6ZVE7 132 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 EXOC3-AS1Q8N2X6 119 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 TXN2Q99757 166 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 SHANK2-AS3Q9BTD1 123 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 MGAQ8IWI9 3026 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 TTC28Q96AY4 2481 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 C2orf70A6NJV1 201 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 A6NNC1 897 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 BATFQ16520 125 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 FBXL19-AS1Q494R0 122 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 PRNTQ86SH4 94 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 CIARTQ8N365 385 aaPredicted RBP14.4□□□□□ -0.1
TDP2-202ENST00000378198 CHCHD1Q96BP2 118 aaKnown RBP14.4□□□□□ -0.1
TDP2-202ENST00000378198 URB1-AS1Q96HZ7 61 aa14.4□□□□□ -0.1
TDP2-202ENST00000378198 TRBV19A0A075B6N1 114 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 TRAV8-1A0A0A6YYK1 113 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 C20orf202A1L168 122 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 H3BRN7 92 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 NBR2O15453 112 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 COL5A1-AS1Q5SY13 56 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 C16orf54Q6UWD8 224 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 LYPD1Q8N2G4 141 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 OR4F17Q8NGA8 305 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 LPAR2Q9HBW0 351 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 DPM3Q9P2X0 92 aa14.39□□□□□ -0.11
TDP2-202ENST00000378198 AKAP13Q12802 2813 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 CHEK1O14757 476 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 HNRNPA3P51991 378 aaKnown RBP14.38□□□□□ -0.11
TDP2-202ENST00000378198 LCN12Q6JVE5 192 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 Q6ZN92 141 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 TMEM75Q8N9X5 138 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 OR11H6Q8NGC7 330 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 POLEQ07864 2286 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 TRAV9-2A0A087WT02 112 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 HAX1O00165 279 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 FOXA3P55318 350 aaPredicted RBP14.38□□□□□ -0.11
TDP2-202ENST00000378198 FOXC1Q12948 553 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 LDLRAD2Q5SZI1 272 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 NPBQ8NG41 125 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 NDFIP1Q9BT67 221 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 ZFP30Q9Y2G7 519 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 CEP250Q9BV73 2442 aa14.38□□□□□ -0.11
TDP2-202ENST00000378198 FAM90A27PA6NNH2 459 aa14.37□□□□□ -0.11
TDP2-202ENST00000378198 K7EQM0 130 aa14.37□□□□□ -0.11
TDP2-202ENST00000378198 SIAH2O43255 324 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms