RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TRAV20A0A0B4J274 112 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 GZMBP10144 247 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 PRR31Q5SQ13 230 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 C1orf122Q6ZSJ8 110 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 TMEM18Q96B42 140 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 FANCD2OSQ96PS1 177 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 SRSF8Q9BRL6 282 aaKnown RBP15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 PRO1933Q9H354 126 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 MAP1AP78559 2803 aaPredicted RBP15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 TRAV8-1A0A0A6YYK1 113 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 IGHV2-70DA0A0C4DH43 119 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 GATCO43716 136 aaKnown RBP15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 TMEM183BQ1AE95 376 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 ZNF562Q6V9R5 426 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 TBX15Q96SF7 602 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 ASCL2Q99929 193 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 TP53TG3Q9ULZ0 132 aa15.16■□□□□ 0.02
PCDHA4-201ENST00000378125 SMIM27A0A1W2PRY6 76 aa15.15■□□□□ 0.02
PCDHA4-201ENST00000378125 GNG7O60262 68 aa15.15■□□□□ 0.02
PCDHA4-201ENST00000378125 CRISP2P16562 243 aa15.15■□□□□ 0.02
PCDHA4-201ENST00000378125 Q71RC1 249 aaPredicted RBP15.15■□□□□ 0.02
PCDHA4-201ENST00000378125 MRPL27Q9P0M9 148 aaKnown RBP15.15■□□□□ 0.02
PCDHA4-201ENST00000378125 LMO4P61968 165 aa15.15■□□□□ 0.02
PCDHA4-201ENST00000378125 SH2D7A6NKC9 451 aaPredicted RBP15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 OR2J3O76001 311 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 FCGR2BP31994 310 aaPredicted RBP15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 JOSD1Q15040 202 aaPredicted RBP15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 Q56UQ5 140 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 LINC00322Q6ZN03 302 aaPredicted RBP15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 ZNF491Q8N8L2 437 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 ATG101Q9BSB4 218 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 IGHV3OR16-10A0A075B7F0 116 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 TCRAP04437 139 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 TMEM136Q6ZRR5 245 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 Q8N6K4 173 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 C5orf17Q8NAS9 161 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 RNF125Q96EQ8 232 aa15.14■□□□□ 0.01
PCDHA4-201ENST00000378125 IGLV11-55A0A075B6I3 123 aa15.13■□□□□ 0.01
PCDHA4-201ENST00000378125 NDUFB8O95169 186 aa15.13■□□□□ 0.01
PCDHA4-201ENST00000378125 SAA4P35542 130 aa15.13■□□□□ 0.01
PCDHA4-201ENST00000378125 MINOS1Q5TGZ0 78 aa15.13■□□□□ 0.01
PCDHA4-201ENST00000378125 GNB1LQ9BYB4 327 aa15.13■□□□□ 0.01
PCDHA4-201ENST00000378125 MINOS1-NBL1R4GNA1 71 aa15.13■□□□□ 0.01
PCDHA4-201ENST00000378125 CACNA1BQ00975 2339 aa15.13■□□□□ 0.01
PCDHA4-201ENST00000378125 IGHV4-39P01824 125 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 CD33P20138 364 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 HSPB9Q9BQS6 159 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 IGHV3OR16-8A0A075B7F1 116 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 IGHV7-81A0A0B4J1V7 117 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 IGHV3-35A0A0C4DH35 117 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 SERF1AO75920 110 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 LINC00310P59036 64 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 USF2Q15853 346 aaPredicted RBP15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 BAGE3Q86Y29 109 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 CMTM2Q8TAZ6 248 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 GPR82Q96P67 336 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 C7orf69Q9H7B7 122 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 UTP20O75691 2785 aaKnown RBP15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 FLNCQ14315 2725 aa15.12■□□□□ 0.01
PCDHA4-201ENST00000378125 CACNA1AO00555 2505 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 OR2T8A6NH00 312 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 NPIPB5A8MRT5 1133 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 TOMM40O96008 361 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 HIST1H1EP10412 219 aaKnown RBP15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 EGR2P11161 476 aaPredicted RBP15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 GOLT1AQ6ZVE7 132 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 AJUBAQ96IF1 538 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 SHANK2-AS3Q9BTD1 123 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 IZUMO1RA6ND01 250 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 Q8N9W7 124 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 NUP35Q8NFH5 326 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 KLF12Q9Y4X4 402 aa15.11■□□□□ 0.01
PCDHA4-201ENST00000378125 F8W735 103 aaPredicted RBP15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 AMY1AP04745 511 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 FAM106CPP0CH98 169 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 UBE2E1P51965 193 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 MFAP4P55083 255 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 FAM231DQ6ZW35 169 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 PRNTQ86SH4 94 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 TTC9CQ8N5M4 171 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 MBD6Q96DN6 1003 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 GRAMD2BQ96HH9 432 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 TMEM68Q96MH6 324 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 OOSP1A8MZH6 123 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 H3BRN7 92 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 EBI3Q14213 229 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 ECSCRQ19T08 205 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 TCF24Q7RTU0 167 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 BPIFA4PQ86YQ2 179 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 CIARTQ8N365 385 aaPredicted RBP15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 NEU1Q99519 415 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 TMUB1Q9BVT8 246 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 ZNF331Q9NQX6 463 aaPredicted RBP15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 C21orf62Q9NYP8 219 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 TMEM14CQ9P0S9 112 aa15.1■□□□□ 0.01
PCDHA4-201ENST00000378125 WDR73Q6P4I2 378 aa15.09■□□□□ 0.01
PCDHA4-201ENST00000378125 FMC1Q96HJ9 113 aa15.09■□□□□ 0.01
PCDHA4-201ENST00000378125 GNB4Q9HAV0 340 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms