RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 RPL36ALQ969Q0 106 aaKnown RBP15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 D6R8Y8 96 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 DEFB121Q5J5C9 76 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 C9orf139Q6ZV77 190 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 TAF1LQ8IZX4 1826 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 TCRAP04437 139 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 LYZL1Q6UWQ5 148 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 TMEM190Q8WZ59 177 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 GAFA1Q96PS6 74 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 JPT2Q9H910 190 aa15.57■□□□□ 0.08
TBC1D4-201ENST00000377625 BRWD3Q6RI45 1802 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 BUB1B-PAK6H3BSN5 160 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 M0R2P5 195 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 PIP4P2Q8N4L2 257 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 DEFB104AQ8WTQ1 72 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 GAS1P54826 345 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 FXYD7P58549 80 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 NDUFAF3Q9BU61 184 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 SMPXQ9UHP9 88 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 SBF2Q86WG5 1849 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 FCN3O75636 299 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 IGKV1-5P01602 117 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 MDS2Q8NDY4 140 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 AGMATQ9BSE5 352 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 IGHV3-53P01767 116 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 RIPPLY3P57055 190 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 SRSF6Q13247 344 aaKnown RBP15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 LILRA1O75019 489 aa15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 SUPT4H1P63272 117 aaKnown RBP15.56■□□□□ 0.08
TBC1D4-201ENST00000377625 CHD5Q8TDI0 1954 aa15.55■□□□□ 0.08
TBC1D4-201ENST00000377625 PRR31Q5SQ13 230 aa15.55■□□□□ 0.08
TBC1D4-201ENST00000377625 PNRC2Q9NPJ4 139 aaKnown RBP15.55■□□□□ 0.08
TBC1D4-201ENST00000377625 CLPSP04118 112 aa15.55■□□□□ 0.08
TBC1D4-201ENST00000377625 NPC2P61916 151 aa15.55■□□□□ 0.08
TBC1D4-201ENST00000377625 ASCL4Q6XD76 172 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 TMEM242Q9NWH2 141 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 ERG28Q9UKR5 140 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 HGFACQ04756 655 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 ZNF474Q6S9Z5 364 aaPredicted RBP15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 ZNF329Q86UD4 541 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 TMEM249Q2WGJ8 235 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 NMSQ5H8A3 153 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 ZNF479Q96JC4 524 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 C5orf63A6NC05 138 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 TMEM238C9JI98 176 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 DTX1Q86Y01 620 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 KLHL30-AS1Q8NEE0 82 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 Q8TAT8 98 aa15.54■□□□□ 0.08
TBC1D4-201ENST00000377625 MBD3L4A6NDZ8 208 aaPredicted RBP15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 MBD3L3A6NE82 208 aaPredicted RBP15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 MBD3L5A6NJ08 208 aaPredicted RBP15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 UNQ6494/PRO21346Q6UXR6 183 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 LCNL1Q6ZST4 164 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 MBD3L2Q8NHZ7 208 aaPredicted RBP15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 USMG5Q96IX5 58 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 LINC00477Q96M19 166 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 TRAV8-4A0A0B4J246 113 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 ATXN8Q156A1 80 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 CACNA1DQ01668 2161 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 SH2D1AO60880 128 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 HSD52Q0P140 79 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 SPAG8Q99932 426 aaPredicted RBP15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 KLHDC3Q9BQ90 382 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 PAX4O43316 350 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 LINC01559Q495D7 138 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 TMEM14EPQ6UXP3 125 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 SIGLEC9Q9Y336 463 aa15.53■□□□□ 0.08
TBC1D4-201ENST00000377625 LINC00473A8K010 186 aa15.52■□□□□ 0.08
TBC1D4-201ENST00000377625 TEX43Q6ZNM6 134 aa15.52■□□□□ 0.08
TBC1D4-201ENST00000377625 RPP25LQ8N5L8 163 aaKnown RBP15.52■□□□□ 0.08
TBC1D4-201ENST00000377625 A8MWV9 139 aa15.52■□□□□ 0.08
TBC1D4-201ENST00000377625 LCN12Q6JVE5 192 aa15.52■□□□□ 0.08
TBC1D4-201ENST00000377625 C5orf24Q7Z6I8 188 aa15.52■□□□□ 0.08
TBC1D4-201ENST00000377625 HIST1H2BLQ99880 126 aa15.52■□□□□ 0.08
TBC1D4-201ENST00000377625 TRAV1-1A0A0B4J248 108 aa15.52■□□□□ 0.07
TBC1D4-201ENST00000377625 COL8A2P25067 703 aa15.52■□□□□ 0.07
TBC1D4-201ENST00000377625 GATD1Q8NB37 220 aa15.52■□□□□ 0.07
TBC1D4-201ENST00000377625 SSC4DQ8WTU2 575 aa15.52■□□□□ 0.07
TBC1D4-201ENST00000377625 TRBV24-1A0A075B6N3 115 aa15.52■□□□□ 0.07
TBC1D4-201ENST00000377625 CXCL1P09341 107 aa15.52■□□□□ 0.07
TBC1D4-201ENST00000377625 LINC00587B1AMM8 73 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 LSM4Q9Y4Z0 139 aaKnown RBP15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 IGFL4Q6B9Z1 124 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 UBE2E2Q96LR5 201 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 CYTL1Q9NRR1 136 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 Q6P435 159 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 LINC01551Q86U37 167 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 RALGAPA2Q2PPJ7 1873 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 IGKV1D-17A0A075B6S4 117 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 LOC105371267A0A1B0GV96 52 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 PSG3Q16557 428 aa15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 DMRTC2Q8IXT2 367 aaPredicted RBP15.51■□□□□ 0.07
TBC1D4-201ENST00000377625 FAM223BA6NKX1 122 aa15.5■□□□□ 0.07
TBC1D4-201ENST00000377625 LY6HO94772 140 aa15.5■□□□□ 0.07
TBC1D4-201ENST00000377625 FAM223AQ8IWN6 122 aa15.5■□□□□ 0.07
TBC1D4-201ENST00000377625 MS4A6AQ9H2W1 248 aa15.5■□□□□ 0.07
TBC1D4-201ENST00000377625 CACNA1GO43497 2377 aa15.5■□□□□ 0.07
TBC1D4-201ENST00000377625 LYPD2Q6UXB3 125 aa15.5■□□□□ 0.07
TBC1D4-201ENST00000377625 INSP01308 110 aa15.5■□□□□ 0.07
TBC1D4-201ENST00000377625 CRIM1Q9NZV1 1036 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms