RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 TMEM116Q8NCL8 245 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 OR1L4Q8NGR5 311 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 MRPL32Q9BYC8 188 aaKnown RBP11.09□□□□□ -0.63
CPT1A-202ENST00000376618 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 ZNF586Q9NXT0 402 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 EPDR1Q9UM22 224 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 LOC105371242A0A075B767 164 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 A0A1B0GV90 55 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 I3L2K1 104 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 PMCHP20382 165 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 TPTE2P1Q5T6R2 138 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 RAB1BQ9H0U4 201 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 Q9H3A6 140 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 LRRK2Q5S007 2527 aa11.09□□□□□ -0.63
CPT1A-202ENST00000376618 INS-IGF2F8WCM5 200 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 FAM120AOSQ5T036 256 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 BEND2Q8NDZ0 799 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 C19orf24Q9BVV8 132 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 CDC42EP3Q9UKI2 254 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 NBPF19A0A087WUL8 3843 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 K7EIM0 57 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 M0R3E3 92 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 BMPR1BO00238 502 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 GP9P14770 177 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 PKIAP61925 76 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 UBE2G1P62253 170 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 RPL19P84098 196 aaKnown RBP11.08□□□□□ -0.64
CPT1A-202ENST00000376618 VMO1Q7Z5L0 202 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 POLR3KQ9Y2Y1 108 aaPredicted RBP11.08□□□□□ -0.64
CPT1A-202ENST00000376618 DOPEY2Q9Y3R5 2298 aa11.08□□□□□ -0.64
CPT1A-202ENST00000376618 HIGD1CA8MV81 97 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 CFHR4Q92496 578 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 PERPQ96FX8 193 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 NEU1Q99519 415 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 RASL11BQ9BPW5 248 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 SAMD10Q9BYL1 202 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 SLC25A39Q9BZJ4 359 aaPredicted RBP11.07□□□□□ -0.64
CPT1A-202ENST00000376618 OSTCQ9NRP0 149 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 CBLN4Q9NTU7 201 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 DPM3Q9P2X0 92 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
CPT1A-202ENST00000376618 ABCA12Q86UK0 2595 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 TSTD3H0UI37 97 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 MYCNOSP40205 109 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 TOMM20LQ6UXN7 152 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 TBX15Q96SF7 602 aa11.07□□□□□ -0.64
CPT1A-202ENST00000376618 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 A8MWP6 167 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 ZNF253O75346 499 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 IL4P05112 153 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 FCGR2BP31994 310 aaPredicted RBP11.06□□□□□ -0.64
CPT1A-202ENST00000376618 ATP5IP56385 69 aaPredicted RBP11.06□□□□□ -0.64
CPT1A-202ENST00000376618 PMCHL1Q16048 86 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 C11orf71Q6IPW1 123 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 GOLT1AQ6ZVE7 132 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 PRNTQ86SH4 94 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 TMEM68Q96MH6 324 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 RBM14Q96PK6 669 aaKnown RBP11.06□□□□□ -0.64
CPT1A-202ENST00000376618 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 GATCO43716 136 aaKnown RBP11.06□□□□□ -0.64
CPT1A-202ENST00000376618 NTF3P20783 257 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 FOXA3P55318 350 aaPredicted RBP11.06□□□□□ -0.64
CPT1A-202ENST00000376618 KRTDAPP60985 99 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 SELENOTP62341 195 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 MUC21Q5SSG8 566 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 LY6G5BQ8NDX9 201 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 OR5R1Q8NH85 324 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 C8orf46Q8TAG6 207 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 TNFRSF14Q92956 283 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 TRGV9Q99603 122 aa11.06□□□□□ -0.64
CPT1A-202ENST00000376618 IGHV3OR16-13A0A075B7E8 117 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 IGHV3-74A0A0B4J1X5 117 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 NBR2O15453 112 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 RNF224P0DH78 156 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 FBXL19-AS1Q494R0 122 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 ATOH7Q8N100 152 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 PGLYRP4Q96LB8 373 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 ATG101Q9BSB4 218 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 FBXL7Q9UJT9 491 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 HIGD1AQ9Y241 93 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 LY96Q9Y6Y9 160 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 GTSF1Q8WW33 167 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 C22orf15Q8WYQ4 148 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 FBN2P35556 2912 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 OR2T8A6NH00 312 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 OR2J3O76001 311 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
CPT1A-202ENST00000376618 ETFRF1Q6IPR1 90 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 TIMD4Q96H15 378 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 C7orf69Q9H7B7 122 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 LINC00527Q9UJ94 153 aa11.05□□□□□ -0.64
CPT1A-202ENST00000376618 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms