RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SDF2L1Q9HCN8 221 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 TMEM242Q9NWH2 141 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 NAT8Q9UHE5 227 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
PDPN-202ENST00000376057 NAV2Q8IVL1 2488 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 TGOLN2O43493 480 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 OR7C2O60412 319 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 LYPD1Q8N2G4 141 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 ZNF702PQ9H963 129 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 CENPEQ02224 2701 aa8.63□□□□□ -1.03
PDPN-202ENST00000376057 TRAV5A0A0B4J249 113 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
PDPN-202ENST00000376057 HOXA3O43365 443 aaPredicted RBP8.62□□□□□ -1.03
PDPN-202ENST00000376057 PSMB8P28062 276 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 LYZP61626 148 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 MYOZ3Q8TDC0 251 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 CSMD2Q7Z408 3487 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 DNASE2O00115 360 aaPredicted RBP8.62□□□□□ -1.03
PDPN-202ENST00000376057 TSPAN4O14817 238 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 EIF3GO75821 320 aaKnown RBP eCLIP8.62□□□□□ -1.03
PDPN-202ENST00000376057 TRGV3P03979 118 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 CLEC3BP05452 202 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 HIST1H1EP10412 219 aaKnown RBP8.62□□□□□ -1.03
PDPN-202ENST00000376057 UBE2L3P68036 154 aaKnown RBP8.62□□□□□ -1.03
PDPN-202ENST00000376057 C9orf152Q5JTZ5 239 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 GPR82Q96P67 336 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 CHRDL1Q9BU40 450 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 MED13LQ71F56 2210 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 OR2T8A6NH00 312 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 C9JCJ5 164 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 BMPR1BO00238 502 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 IL4P05112 153 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 NPPCP23582 126 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 ATP5G3P48201 142 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 FOXE3Q13461 319 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 TMEM241Q24JQ0 296 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 C1orf194Q5T5A4 169 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 CST9LP1Q5W188 147 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 SIGLECL1Q8N7X8 197 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 PARLQ9H300 379 aa8.62□□□□□ -1.03
PDPN-202ENST00000376057 CXorf65A6NEN9 183 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 SMAD7O15105 426 aaKnown RBP8.61□□□□□ -1.03
PDPN-202ENST00000376057 ELANEP08246 267 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 PDE6HQ13956 83 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 AWAT1Q58HT5 328 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 Q6ZS46 218 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 BPIFA4PQ86YQ2 179 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 C7orf77A4D0Y5 90 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 ZNF253O75346 499 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 IGLC2P0DOY2 106 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 USF2Q15853 346 aaPredicted RBP8.61□□□□□ -1.03
PDPN-202ENST00000376057 RABAC1Q9UI14 185 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 U3KQE9 123 aa8.61□□□□□ -1.03
PDPN-202ENST00000376057 AKAP9Q99996 3911 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 ZNF98A6NK75 572 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 S100A9P06702 114 aaKnown RBP8.6□□□□□ -1.03
PDPN-202ENST00000376057 NBEAP1P0C6P0 100 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 UBE2G2P60604 165 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 HIST1H2BAQ96A08 127 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 SMIM7Q9BQ49 75 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 CTDSP1Q9GZU7 261 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 NDUFA4O00483 81 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 CD99P14209 185 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 GPR183P32249 361 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 TPPP2P59282 170 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 SLC35B1P78383 322 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 KIAA0141Q14154 515 aaPredicted RBP8.6□□□□□ -1.03
PDPN-202ENST00000376057 TOMM20LQ6UXN7 152 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 ZNF329Q86UD4 541 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 NOL4LQ96MY1 436 aaPredicted RBP8.6□□□□□ -1.03
PDPN-202ENST00000376057 SMCO4Q9NRQ5 59 aa8.6□□□□□ -1.03
PDPN-202ENST00000376057 PUS1Q9Y606 427 aaKnown RBP eCLIP8.6□□□□□ -1.03
PDPN-202ENST00000376057 SRP14P37108 136 aaKnown RBP8.59□□□□□ -1.03
PDPN-202ENST00000376057 TAS2R60P59551 318 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 CLEC19AQ6UXS0 136 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 C2CD4CQ8TF44 421 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 WFDC12Q8WWY7 111 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 SMIM12Q96EX1 92 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 MS4A10Q96PG2 267 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 A0A087X0K7 114 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 TRBV6-1A0A0K0K1D8 114 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 PYYP10082 97 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 RPL7P18124 248 aaKnown RBP8.59□□□□□ -1.03
PDPN-202ENST00000376057 CRYBB3P26998 211 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 MEOX2P50222 304 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 BTN1A1Q13410 526 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 TEX38Q6PEX7 206 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 YAE1D1Q9NRH1 226 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 KLF12Q9Y4X4 402 aa8.59□□□□□ -1.03
PDPN-202ENST00000376057 CLPSL1A2RUU4 121 aa8.58□□□□□ -1.04
PDPN-202ENST00000376057 NDUFB4O95168 129 aa8.58□□□□□ -1.04
PDPN-202ENST00000376057 OR10J4P0C629 311 aa8.58□□□□□ -1.04
PDPN-202ENST00000376057 S100A12P80511 92 aa8.58□□□□□ -1.04
PDPN-202ENST00000376057 OR4F17Q8NGA8 305 aa8.58□□□□□ -1.04
PDPN-202ENST00000376057 S4R3C0 116 aa8.58□□□□□ -1.04
PDPN-202ENST00000376057 ABCA12Q86UK0 2595 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms