RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PMCHL2Q9BQD1 86 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 IGKV1D-37A0A075B6S9 117 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 CSN3P07498 182 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 LDLRAD2Q5SZI1 272 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 NCOR1P1Q9H4R4 102 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 SUB1P53999 127 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC40-203ENST00000374877 BVES-AS1Q5T3Y7 98 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 VPS25Q9BRG1 176 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 DYSFO75923 2080 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 hADV38S2A0JD32 116 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 TOX4O94842 621 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 NBEAP1P0C6P0 100 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 PSG1P11464 419 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 CCL3L1P16619 93 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 PERPQ96FX8 193 aa8.91□□□□□ -0.98
CCDC40-203ENST00000374877 IGHV3-21A0A0B4J1V1 117 aa8.9□□□□□ -0.98
CCDC40-203ENST00000374877 APELAP0DMC3 54 aa8.9□□□□□ -0.98
CCDC40-203ENST00000374877 GLRXP35754 106 aa8.9□□□□□ -0.98
CCDC40-203ENST00000374877 LY6DQ14210 128 aa8.9□□□□□ -0.98
CCDC40-203ENST00000374877 ARL6IP6Q8N6S5 226 aa8.9□□□□□ -0.98
CCDC40-203ENST00000374877 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
CCDC40-203ENST00000374877 MAP1LC3CQ9BXW4 147 aa8.9□□□□□ -0.98
CCDC40-203ENST00000374877 CRXO43186 299 aaPredicted RBP8.9□□□□□ -0.99
CCDC40-203ENST00000374877 HCP5Q6MZN7 132 aa8.9□□□□□ -0.99
CCDC40-203ENST00000374877 FAM222BQ8WU58 562 aa8.9□□□□□ -0.99
CCDC40-203ENST00000374877 FSTL3O95633 263 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 MYCNOSP40205 109 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 ZNF788Q6ZQV5 615 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 ZNF833PQ6ZTB9 187 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 GSX1Q9H4S2 264 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-203ENST00000374877 A0A087X0K7 114 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 DIAPH2-AS1Q14236 149 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 C12orf54Q6X4T0 127 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 RBPMS2Q6ZRY4 209 aaKnown RBP8.89□□□□□ -0.99
CCDC40-203ENST00000374877 STXBP6Q8NFX7 210 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 OR10X1Q8NGY0 326 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 RAI1Q7Z5J4 1906 aaPredicted RBP8.89□□□□□ -0.99
CCDC40-203ENST00000374877 TRAV8-1A0A0A6YYK1 113 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 CGB1A6NKQ9 187 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 IGHV1-46P01743 117 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 LIPFP07098 398 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 COL8A1P27658 744 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 MLST8Q9BVC4 326 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 SH3BGRL2Q9UJC5 107 aa8.89□□□□□ -0.99
CCDC40-203ENST00000374877 SNAI2O43623 268 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 SLC25A17O43808 307 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 RUSC1-AS1Q66K80 236 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 C5orf17Q8NAS9 161 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 CST9LQ9H4G1 147 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 DMXL2Q8TDJ6 3036 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 LOC102724200A0A096LPH7 203 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-203ENST00000374877 C22orf46C9J442 243 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 HTR1DP28221 377 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 DEFB125Q8N687 156 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 VSTM2AQ8TAG5 236 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 TMEM167AQ8TBQ9 72 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 PRSS22Q9GZN4 317 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 Q9H3A6 140 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 TPSG1Q9NRR2 321 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 KLF12Q9Y4X4 402 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 BOD1L1Q8NFC6 3051 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 CFAP47Q6ZTR5 3102 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 C16orf97H3BN30 126 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 PRB4P10163 310 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-203ENST00000374877 CCL8P80075 99 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 THAP8Q8NA92 274 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 OR5AN1Q8NGI8 311 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 H1FXQ92522 213 aaKnown RBP8.88□□□□□ -0.99
CCDC40-203ENST00000374877 FMC1Q96HJ9 113 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 C1RLQ9NZP8 487 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 SOX21Q9Y651 276 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-203ENST00000374877 LINC00312Q9Y6C7 94 aa8.88□□□□□ -0.99
CCDC40-203ENST00000374877 TCRAP04437 139 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 GATA4P43694 442 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 RHOGP84095 191 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 FBXL19-AS1Q494R0 122 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 CIARTQ8N365 385 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-203ENST00000374877 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 SCRT2Q9NQ03 307 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 MGAQ8IWI9 3026 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.87□□□□□ -0.99
CCDC40-203ENST00000374877 A0A1W2PPI3 338 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 C19orf71A6NCJ1 209 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 ENSAO43768 121 aaKnown RBP8.87□□□□□ -0.99
CCDC40-203ENST00000374877 LTAP01374 205 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 SMIM12Q96EX1 92 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 LINC00574Q9H8X3 128 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 IGLV3-9A0A075B6K5 115 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 IGHV3-72A0A0B4J1Y9 119 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 OR5AL1P0C617 328 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 FAM27E3Q08E93 113 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 TMEM30BQ3MIR4 351 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 OCIAD2Q56VL3 154 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 CT83Q5H943 113 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 PET117Q6UWS5 81 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 PRNTQ86SH4 94 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 ZCCHC24Q8N2G6 241 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms