RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 ST6GALNAC3Q8NDV1 305 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 PARD6GQ9BYG4 376 aaPredicted RBP9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 BPESC1Q9GZL8 116 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 CHODLQ9H9P2 273 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 C21orf62Q9NYP8 219 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 UFC1Q9Y3C8 167 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 M0QZ24 198 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 GGCTO75223 188 aaKnown RBP9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 CX3CL1P78423 397 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 PMCHL1Q16048 86 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 ATG101Q9BSB4 218 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 DMRT1Q9Y5R6 373 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 A0A1B0GV90 55 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 A0A1W2PRE2 83 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 TBL2Q9Y4P3 447 aaKnown RBP9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 ATMQ13315 3056 aa9.49□□□□□ -0.89
PACSIN1-202ENST00000374043 P0C879 139 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 NUDT11Q96G61 164 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 C20orf202A1L168 122 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 S100A4P26447 101 aaKnown RBP9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 PPIFP30405 207 aaKnown RBP9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 TPTE2P1Q5T6R2 138 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 PMCHL2Q9BQD1 86 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 Q6ZN92 141 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 ABCA12Q86UK0 2595 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 HLA-DQA1P01909 254 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 HTN1P15515 57 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 ARL3P36405 182 aa9.48□□□□□ -0.89
PACSIN1-202ENST00000374043 K7EN84 100 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 ATP5IP56385 69 aaPredicted RBP9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 CLEC2AQ6UVW9 174 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 MAPK1IP1LQ8NDC0 245 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 GOSR1O95249 250 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 GPR82Q96P67 336 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 ITGB1BP1O14713 200 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 HLA-DRB1P01911 266 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 PRR20EP86478 221 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 PRR20CP86479 221 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 PRR20DP86480 221 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 PRR20BP86481 221 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 PRR20AP86496 221 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 SMIM15Q7Z3B0 74 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 OR8A1Q8NGG7 326 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 NEU4Q8WWR8 484 aaPredicted RBP9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 ST6GALNAC6Q969X2 333 aa9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 F11RQ9Y624 299 aaKnown RBP9.47□□□□□ -0.89
PACSIN1-202ENST00000374043 PKD1L2Q7Z442 2459 aa9.46□□□□□ -0.89
PACSIN1-202ENST00000374043 CGB3P0DN86 165 aa9.46□□□□□ -0.89
PACSIN1-202ENST00000374043 CGB7P0DN87 165 aa9.46□□□□□ -0.89
PACSIN1-202ENST00000374043 COMPP49747 757 aaPredicted RBP9.46□□□□□ -0.89
PACSIN1-202ENST00000374043 FAM168AQ92567 244 aa9.46□□□□□ -0.89
PACSIN1-202ENST00000374043 SLC25A39Q9BZJ4 359 aaPredicted RBP9.46□□□□□ -0.89
PACSIN1-202ENST00000374043 RABAC1Q9UI14 185 aa9.46□□□□□ -0.89
PACSIN1-202ENST00000374043 F2Z2F3 143 aa9.46□□□□□ -0.9
PACSIN1-202ENST00000374043 ZNF138P52744 262 aa9.46□□□□□ -0.9
PACSIN1-202ENST00000374043 IGF2-ASQ6U949 168 aa9.46□□□□□ -0.9
PACSIN1-202ENST00000374043 CENPVQ7Z7K6 275 aaPredicted RBP9.46□□□□□ -0.9
PACSIN1-202ENST00000374043 Q8TAT8 98 aa9.46□□□□□ -0.9
PACSIN1-202ENST00000374043 TRAV40A0A0B4J280 105 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 CDSNQ15517 529 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 TWIST1Q15672 202 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 MCRIP2Q9BUT9 160 aaKnown RBP9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 TMEM189A5PLL7 270 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 GCGP01275 180 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 MT-ND6P03923 174 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 OR5AL1P0C617 328 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 C11orf42Q8N5U0 333 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 C14orf144Q96I85 54 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 SLC25A2Q9BXI2 301 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 DCHS1Q96JQ0 3298 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 IGKV2-40A0A087WW87 121 aaPredicted RBP9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 IGKV2D-40P01614 121 aaPredicted RBP9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 RHOGP84095 191 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 VWC2Q2TAL6 325 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 RUSC1-AS1Q66K80 236 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 C17orf77Q96MU5 243 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 CCL19Q99731 98 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 FOXL1Q12952 345 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 C5orf64Q2M2E5 130 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 LCN12Q6JVE5 192 aa9.45□□□□□ -0.9
PACSIN1-202ENST00000374043 KMT2EQ8IZD2 1858 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 RNF224P0DH78 156 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 PDLIM4P50479 330 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 C7orf69Q9H7B7 122 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 LAMA5O15230 3695 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 G3V318 75 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 NDPQ00604 133 aa9.44□□□□□ -0.9
PACSIN1-202ENST00000374043 C3orf36Q3SXR2 165 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms