RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ZNF705DP0CH99 300 aaPredicted RBP18.86■□□□□ 0.61
CDK9-201ENST00000373264 ZNF705BP0CI00 300 aaPredicted RBP18.86■□□□□ 0.61
CDK9-201ENST00000373264 C17orf77Q96MU5 243 aa18.86■□□□□ 0.61
CDK9-201ENST00000373264 TBX15Q96SF7 602 aa18.86■□□□□ 0.61
CDK9-201ENST00000373264 K7EIM0 57 aa18.86■□□□□ 0.61
CDK9-201ENST00000373264 TPPP2P59282 170 aa18.86■□□□□ 0.61
CDK9-201ENST00000373264 HES1Q14469 280 aa18.86■□□□□ 0.61
CDK9-201ENST00000373264 ZNF586Q9NXT0 402 aa18.86■□□□□ 0.61
CDK9-201ENST00000373264 HIGD1AQ9Y241 93 aa18.86■□□□□ 0.61
CDK9-201ENST00000373264 TRBV9A0A0B4J1U6 114 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 A0A1B0GV90 55 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 Q0VG73 95 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 C11orf71Q6IPW1 123 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 NEU1Q99519 415 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 SAMD10Q9BYL1 202 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 DPM3Q9P2X0 92 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 GPR6P46095 362 aaPredicted RBP18.85■□□□□ 0.61
CDK9-201ENST00000373264 TCF24Q7RTU0 167 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 SLC25A39Q9BZJ4 359 aaPredicted RBP18.85■□□□□ 0.61
CDK9-201ENST00000373264 CBLN4Q9NTU7 201 aa18.85■□□□□ 0.61
CDK9-201ENST00000373264 WDR73Q6P4I2 378 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 TOMM20LQ6UXN7 152 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 RASL11BQ9BPW5 248 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 LOC105371242A0A075B767 164 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 HIGD1CA8MV81 97 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 ESDP10768 282 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 LY6DQ14210 128 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 LURAP1LQ8IV03 231 aa18.84■□□□□ 0.61
CDK9-201ENST00000373264 NBR2O15453 112 aa18.83■□□□□ 0.61
CDK9-201ENST00000373264 ZNF253O75346 499 aa18.83■□□□□ 0.61
CDK9-201ENST00000373264 CAMPP49913 170 aa18.83■□□□□ 0.61
CDK9-201ENST00000373264 STXBP6Q8NFX7 210 aa18.83■□□□□ 0.61
CDK9-201ENST00000373264 TMEM68Q96MH6 324 aa18.83■□□□□ 0.61
CDK9-201ENST00000373264 FBXL7Q9UJT9 491 aa18.83■□□□□ 0.61
CDK9-201ENST00000373264 SPTAN1Q13813 2472 aaKnown RBP18.83■□□□□ 0.61
CDK9-201ENST00000373264 FAM231DQ6ZW35 169 aa18.83■□□□□ 0.6
CDK9-201ENST00000373264 OR11H6Q8NGC7 330 aa18.83■□□□□ 0.6
CDK9-201ENST00000373264 APCSP02743 223 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 TCRAP04437 139 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 PMCHP20382 165 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 ZFP36P26651 326 aaKnown RBP18.82■□□□□ 0.6
CDK9-201ENST00000373264 PLP1P60201 277 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 NHLH1Q02575 133 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 FAM19A2Q8N3H0 131 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 GRAMD2BQ96HH9 432 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 KLF12Q9Y4X4 402 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 MT-ND6P03923 174 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 USF2Q15853 346 aaPredicted RBP18.82■□□□□ 0.6
CDK9-201ENST00000373264 TIMD4Q96H15 378 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 ATG101Q9BSB4 218 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 MLST8Q9BVC4 326 aa18.82■□□□□ 0.6
CDK9-201ENST00000373264 ZNF331Q9NQX6 463 aaPredicted RBP18.82■□□□□ 0.6
CDK9-201ENST00000373264 A0A1W2PS18 150 aa18.81■□□□□ 0.6
CDK9-201ENST00000373264 NDPQ00604 133 aa18.81■□□□□ 0.6
CDK9-201ENST00000373264 VN1R17PQ8TDU5 208 aa18.81■□□□□ 0.6
CDK9-201ENST00000373264 NOL4LQ96MY1 436 aaPredicted RBP18.81■□□□□ 0.6
CDK9-201ENST00000373264 GPR82Q96P67 336 aa18.81■□□□□ 0.6
CDK9-201ENST00000373264 PAFAH1B2P68402 229 aa18.81■□□□□ 0.6
CDK9-201ENST00000373264 NDUFAF3Q9BU61 184 aa18.81■□□□□ 0.6
CDK9-201ENST00000373264 TBL2Q9Y4P3 447 aaKnown RBP18.81■□□□□ 0.6
CDK9-201ENST00000373264 HLA-DQA1P01909 254 aa18.8■□□□□ 0.6
CDK9-201ENST00000373264 GPX1P07203 203 aa18.8■□□□□ 0.6
CDK9-201ENST00000373264 CIARTQ8N365 385 aaPredicted RBP18.8■□□□□ 0.6
CDK9-201ENST00000373264 C5orf17Q8NAS9 161 aa18.8■□□□□ 0.6
CDK9-201ENST00000373264 RBM14Q96PK6 669 aaKnown RBP18.8■□□□□ 0.6
CDK9-201ENST00000373264 IGHV3-23P01764 117 aa18.8■□□□□ 0.6
CDK9-201ENST00000373264 ODF3BA8MYP8 253 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 EREGO14944 169 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 MRPL27Q9P0M9 148 aaKnown RBP18.79■□□□□ 0.6
CDK9-201ENST00000373264 BRS3P32247 399 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 AMTP48728 403 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 KRTDAPP60985 99 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 PAX2Q02962 417 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 GOLT1AQ6ZVE7 132 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 VMO1Q7Z5L0 202 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 TSKUQ8WUA8 353 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 GTSF1Q8WW33 167 aa18.79■□□□□ 0.6
CDK9-201ENST00000373264 MAP1AP78559 2803 aaPredicted RBP18.79■□□□□ 0.6
CDK9-201ENST00000373264 LTAP01374 205 aa18.78■□□□□ 0.6
CDK9-201ENST00000373264 UCNP55089 124 aa18.78■□□□□ 0.6
CDK9-201ENST00000373264 NCBP2LA6PVI3 153 aaKnown RBP18.78■□□□□ 0.6
CDK9-201ENST00000373264 TOMM40O96008 361 aa18.78■□□□□ 0.6
CDK9-201ENST00000373264 C1orf194Q5T5A4 169 aa18.78■□□□□ 0.6
CDK9-201ENST00000373264 SIGLECL1Q8N7X8 197 aa18.78■□□□□ 0.6
CDK9-201ENST00000373264 RNF5Q99942 180 aa18.78■□□□□ 0.6
CDK9-201ENST00000373264 HIST1H1EP10412 219 aaKnown RBP18.77■□□□□ 0.6
CDK9-201ENST00000373264 PRTN3P24158 256 aa18.77■□□□□ 0.6
CDK9-201ENST00000373264 C18orf32Q8TCD1 76 aa18.77■□□□□ 0.6
CDK9-201ENST00000373264 IGLV2-11P01706 119 aa18.77■□□□□ 0.59
CDK9-201ENST00000373264 IL4P05112 153 aa18.77■□□□□ 0.59
CDK9-201ENST00000373264 C5orf64Q2M2E5 130 aa18.77■□□□□ 0.59
CDK9-201ENST00000373264 NRN1Q9NPD7 142 aa18.77■□□□□ 0.59
CDK9-201ENST00000373264 ZMAT5Q9UDW3 170 aaKnown RBP18.77■□□□□ 0.59
CDK9-201ENST00000373264 PAM16Q9Y3D7 125 aa18.77■□□□□ 0.59
CDK9-201ENST00000373264 NDUFA3O95167 84 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 RPL19P84098 196 aaKnown RBP18.76■□□□□ 0.59
CDK9-201ENST00000373264 OR10J3Q5JRS4 329 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 PRNTQ86SH4 94 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 LINC00469Q8N7U9 141 aa18.76■□□□□ 0.59
CDK9-201ENST00000373264 ZNF491Q8N8L2 437 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms