RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 TDRG1Q3Y452 100 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 PRR27Q6MZM9 219 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 NIT1Q86X76 327 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 TMEM190Q8WZ59 177 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 GSX1Q9H4S2 264 aaPredicted RBP9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 LIPFP07098 398 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 HOXB4P17483 251 aaPredicted RBP9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 LHFPL4Q7Z7J7 247 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 RPP21Q9H633 154 aaKnown RBP9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 OTORQ9NRC9 128 aa9.97□□□□□ -0.81
TSPAN6-201ENST00000373020 DCHS1Q96JQ0 3298 aa9.96□□□□□ -0.81
TSPAN6-201ENST00000373020 IGKV1-17P01599 117 aa9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 RNF224P0DH78 156 aa9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 LEMD1Q68G75 181 aa9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 LINC00322Q6ZN03 302 aaPredicted RBP9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 OR11H6Q8NGC7 330 aa9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 CFHR4Q92496 578 aa9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 RBM14Q96PK6 669 aaKnown RBP9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 VAMP8Q9BV40 100 aa9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 SLC25A39Q9BZJ4 359 aaPredicted RBP9.96□□□□□ -0.82
TSPAN6-201ENST00000373020 K7EIM0 57 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 TIMM23O14925 209 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 PMCHP20382 165 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 LYZP61626 148 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 NUTF2P61970 127 aaKnown RBP9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 OR4B1Q8NGF8 309 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 ZZEF1O43149 2961 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 TRBV6-1A0A0K0K1D8 114 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 NPIPB6E9PJ23 425 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 M0R143 59 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 NDUFA3O95167 84 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 MMDQ15546 238 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 Q86TA4 180 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 RASL11BQ9BPW5 248 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 MIEN1Q9BRT3 115 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 FAM103A1Q9BTL3 118 aaKnown RBP9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 WNT10AQ9GZT5 417 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 ONECUT1Q9UBC0 465 aa9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 SOX21Q9Y651 276 aaPredicted RBP9.95□□□□□ -0.82
TSPAN6-201ENST00000373020 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 CTRLP40313 264 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 KRTDAPP60985 99 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 NPBQ8NG41 125 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 ALKBH7Q9BT30 221 aaPredicted RBP9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 GFRA4Q9GZZ7 299 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 RPH3ALQ9UNE2 315 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 A8MWL6 223 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 ODF3BA8MYP8 253 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 H3BTX0 84 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 NBR2O15453 112 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 HTR1DP28221 377 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 C16orf54Q6UWD8 224 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 GTSF1Q8WW33 167 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 DPM3Q9P2X0 92 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 PAM16Q9Y3D7 125 aa9.94□□□□□ -0.82
TSPAN6-201ENST00000373020 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 H3BRN7 92 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 M0R1W7 72 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 HBBP68871 147 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 PLGLAQ15195 96 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 C11orf71Q6IPW1 123 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 SHANK2-AS3Q9BTD1 123 aa9.93□□□□□ -0.82
TSPAN6-201ENST00000373020 P01737 135 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 ADORA2A-AS1P86434 159 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 TCF24Q7RTU0 167 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 RAB1BQ9H0U4 201 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 CCL21O00585 134 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 IGLC2P0DOY2 106 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 CDSNQ15517 529 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 SSBP4Q9BWG4 385 aaPredicted RBP9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 PTPRZ1P23471 2315 aaPredicted RBP9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 DCHS2Q6V1P9 2916 aa9.92□□□□□ -0.82
TSPAN6-201ENST00000373020 A6NNC1 897 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 MRPS12O15235 138 aaKnown RBP9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 MSRB2Q9Y3D2 182 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 ABCA1O95477 2261 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 TRBV19A0A075B6N1 114 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 M0QZK8 103 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 OVOL3O00110 214 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 LY6HO94772 140 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 CNIH1O95406 144 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 CEACAM3P40198 252 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 CAMPP49913 170 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 ZNF705AQ6ZN79 300 aaPredicted RBP9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 RBPMS2Q6ZRY4 209 aaKnown RBP9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 ZNF491Q8N8L2 437 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 ZNF48Q96MX3 618 aaPredicted RBP9.91□□□□□ -0.82
TSPAN6-201ENST00000373020 TPRP12270 2363 aaKnown RBP9.9□□□□□ -0.82
TSPAN6-201ENST00000373020 TRAV8-1A0A0A6YYK1 113 aa9.9□□□□□ -0.82
TSPAN6-201ENST00000373020 PRTN3P24158 256 aa9.9□□□□□ -0.82
TSPAN6-201ENST00000373020 GPR6P46095 362 aaPredicted RBP9.9□□□□□ -0.82
TSPAN6-201ENST00000373020 ARF6P62330 175 aa9.9□□□□□ -0.82
TSPAN6-201ENST00000373020 FBLN7Q53RD9 439 aa9.9□□□□□ -0.82
TSPAN6-201ENST00000373020 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms