RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 OR1L4Q8NGR5 311 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
PDE6C-201ENST00000371447 IL36BQ9NZH7 164 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 CUBNO60494 3623 aa9.35□□□□□ -0.91
PDE6C-201ENST00000371447 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
PDE6C-201ENST00000371447 ZNF705DP0CH99 300 aaPredicted RBP9.35□□□□□ -0.91
PDE6C-201ENST00000371447 ZNF705BP0CI00 300 aaPredicted RBP9.35□□□□□ -0.91
PDE6C-201ENST00000371447 TPTE2P1Q5T6R2 138 aa9.35□□□□□ -0.91
PDE6C-201ENST00000371447 SELENOKQ9Y6D0 94 aa9.35□□□□□ -0.91
PDE6C-201ENST00000371447 SAMD10Q9BYL1 202 aa9.35□□□□□ -0.91
PDE6C-201ENST00000371447 TEX22C9J3V5 150 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 PEX7O00628 323 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 CRISP2P16562 243 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 OR4A5Q8NH83 315 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 BPESC1Q9GZL8 116 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 V9GYV3 84 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 SETD2Q9BYW2 2564 aaPredicted RBP9.34□□□□□ -0.91
PDE6C-201ENST00000371447 ZANQ9Y493 2812 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 CCDC168Q8NDH2 2452 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 IL4P05112 153 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 GZMBP10144 247 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 FCGR2BP31994 310 aaPredicted RBP9.34□□□□□ -0.91
PDE6C-201ENST00000371447 ECSCRQ19T08 205 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 Q56UQ5 140 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 SSX8Q7RTT4 187 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 FXYD5Q96DB9 178 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 PERPQ96FX8 193 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 F11RQ9Y624 299 aaKnown RBP9.34□□□□□ -0.91
PDE6C-201ENST00000371447 IGHV3-49A0A0A0MS15 119 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 A6NNC1 897 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 NDUFS8O00217 210 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 OR2J3O76001 311 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 NTF3P20783 257 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 BMI1P35226 326 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 TMUB1Q9BVT8 246 aa9.34□□□□□ -0.91
PDE6C-201ENST00000371447 NBR2O15453 112 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 TGOLN2O43493 480 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 PMCHP20382 165 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 ZNF137PP52743 207 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 RPL15P61313 204 aaKnown RBP9.33□□□□□ -0.92
PDE6C-201ENST00000371447 FAM120AOSQ5T036 256 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 GOLT1AQ6ZVE7 132 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 TCF24Q7RTU0 167 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 PRNTQ86SH4 94 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 BTF3L4Q96K17 158 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 MUC21A0A0G2JKD1 596 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 MUC21A0A140T8X8 626 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 A0A1W2PRE2 83 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 GNG7O60262 68 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 SERF1AO75920 110 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 CX3CL1P78423 397 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 FOXL1Q12952 345 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 MUC21Q5SSG8 566 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 TMEM18Q96B42 140 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 MS4A10Q96PG2 267 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 HIGD1AQ9Y241 93 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 PSMB11A5LHX3 300 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 SELENOTP62341 195 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 TMEM249Q2WGJ8 235 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 TMEM219Q86XT9 240 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 OR2D3Q8NGH3 330 aa9.33□□□□□ -0.92
PDE6C-201ENST00000371447 SONP18583 2426 aaKnown RBP9.32□□□□□ -0.92
PDE6C-201ENST00000371447 A6NJY4 79 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 CMTM2Q8TAZ6 248 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 MRPL32Q9BYC8 188 aaKnown RBP9.32□□□□□ -0.92
PDE6C-201ENST00000371447 Q9H3A6 140 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 CHODLQ9H9P2 273 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 M0R3E3 92 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 NDPQ00604 133 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 BATFQ16520 125 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 IQCJQ1A5X6 159 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 CIARTQ8N365 385 aaPredicted RBP9.32□□□□□ -0.92
PDE6C-201ENST00000371447 FAM19A2Q8N3H0 131 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 BEND2Q8NDZ0 799 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 C11orf52Q96A22 123 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 GNB4Q9HAV0 340 aa9.32□□□□□ -0.92
PDE6C-201ENST00000371447 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 FNDC10F2Z333 226 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 IGLV2-8P01709 118 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 CD99P14209 185 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 SRIP30626 198 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 CEACAM3P40198 252 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 BRD3OSQ6XYD6 125 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 NRGNQ92686 78 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 NUDT11Q96G61 164 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 TMEM208Q9BTX3 173 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 PRDM13Q9H4Q3 707 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 EPDR1Q9UM22 224 aa9.31□□□□□ -0.92
PDE6C-201ENST00000371447 LOC102724200A0A096LPH7 203 aaPredicted RBP9.31□□□□□ -0.92
PDE6C-201ENST00000371447 ZNF207O43670 478 aaKnown RBP9.31□□□□□ -0.92
PDE6C-201ENST00000371447 ZNF253O75346 499 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms