RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 SCRT1Q9BWW7 348 aa6.34□□□□□ -1.4
COL21A1-203ENST00000370819 FREM1Q5H8C1 2179 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 TIMM23O14925 209 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 ATP5J2P56134 94 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 SNRPD3P62318 126 aaKnown RBP6.33□□□□□ -1.4
COL21A1-203ENST00000370819 PSMG4Q5JS54 123 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 SAMD13Q5VXD3 122 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 CHCHD1Q96BP2 118 aaKnown RBP6.33□□□□□ -1.4
COL21A1-203ENST00000370819 ABHD17AQ96GS6 310 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 LSM4Q9Y4Z0 139 aaKnown RBP6.33□□□□□ -1.4
COL21A1-203ENST00000370819 HELZP42694 1942 aaKnown RBP6.33□□□□□ -1.4
COL21A1-203ENST00000370819 NTN3O00634 580 aaPredicted RBP6.33□□□□□ -1.4
COL21A1-203ENST00000370819 MLNRO43193 412 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 DPM2O94777 84 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 UCNP55089 124 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 KLF17Q5JT82 389 aaPredicted RBP6.33□□□□□ -1.4
COL21A1-203ENST00000370819 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 ATP5L2Q7Z4Y8 100 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 ASCL2Q99929 193 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 PLXND1Q9Y4D7 1925 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 TRBV6-6A0A0A6YYG2 114 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 UBE2L6O14933 153 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 IGHV2-70P01814 119 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 PDLIM4P50479 330 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 PAX9P55771 341 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 SMAGPQ0VAQ4 97 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 Q0VFX4 171 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 KLRB1Q12918 225 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 RRN3P1Q2M238 152 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 ASCL4Q6XD76 172 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 FAM57AQ8TBR7 257 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 SNHG12Q9BXW3 62 aa6.33□□□□□ -1.4
COL21A1-203ENST00000370819 NXT2Q9NPJ8 142 aaKnown RBP6.33□□□□□ -1.4
COL21A1-203ENST00000370819 A0A1B0GWJ7 208 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 IGHV2-5P01817 119 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 TCRAP04437 139 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 SEC11AP67812 179 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 Q6ZS49 121 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 C8orf46Q8TAG6 207 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 RAX2Q96IS3 184 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 MGAMO43451 1857 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-203ENST00000370819 D6R8Y8 96 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 PPBPP02775 128 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 RNASE4P34096 147 aaKnown RBP6.32□□□□□ -1.4
COL21A1-203ENST00000370819 TDGF1P3P51864 188 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 GUSBP1Q15486 140 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 SLC25A48Q6ZT89 311 aaKnown RBP6.32□□□□□ -1.4
COL21A1-203ENST00000370819 OR13C6PQ8NH95 151 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 ZNF479Q96JC4 524 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 POLR3KQ9Y2Y1 108 aaPredicted RBP6.32□□□□□ -1.4
COL21A1-203ENST00000370819 DNAL4O96015 105 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 B3GALT5-AS1P59052 145 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 RHOGP84095 191 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 TNFRSF18Q9Y5U5 241 aa6.32□□□□□ -1.4
COL21A1-203ENST00000370819 IGKV2-40A0A087WW87 121 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-203ENST00000370819 WIPF3A6NGB9 483 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 IGKV2D-40P01614 121 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-203ENST00000370819 CDKN1AP38936 164 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 HSD52Q0P140 79 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 MTURNQ8N3F0 131 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 RNASE6Q93091 150 aaKnown RBP6.31□□□□□ -1.4
COL21A1-203ENST00000370819 VOPP1Q96AW1 172 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 DUX5Q96PT3 197 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 FNDC1Q4ZHG4 1894 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-203ENST00000370819 IGKV1-16P04430 117 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 GTSCR1Q86UQ5 136 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 MS4A6AQ9H2W1 248 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 ANKHD1Q8IWZ3 2542 aaKnown RBP6.31□□□□□ -1.4
COL21A1-203ENST00000370819 NOTCH4Q99466 2003 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 SYS1-DBNDD2H3BUS1 97 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 SAMD5Q5TGI4 173 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 LYZL1Q6UWQ5 148 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 FOXL2NBQ6ZUU3 175 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 BCL6BQ8N143 479 aaPredicted RBP6.31□□□□□ -1.4
COL21A1-203ENST00000370819 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
COL21A1-203ENST00000370819 IGKV1D-17A0A075B6S4 117 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 TRAV8-2A0A0B4J237 113 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 TSPAN13O95857 204 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 RPL15P61313 204 aaKnown RBP6.3□□□□□ -1.4
COL21A1-203ENST00000370819 UBE2V1Q13404 147 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 ZNF726P1Q15940 193 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 CD300EQ496F6 205 aaPredicted RBP6.3□□□□□ -1.4
COL21A1-203ENST00000370819 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 CENPVQ7Z7K6 275 aaPredicted RBP6.3□□□□□ -1.4
COL21A1-203ENST00000370819 Q8TAT8 98 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 CYYR1Q96J86 154 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 SLC25A39Q9BZJ4 359 aaPredicted RBP6.3□□□□□ -1.4
COL21A1-203ENST00000370819 LY96Q9Y6Y9 160 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 PRR14LQ5THK1 2151 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 A0A0G2JLM5 398 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 ZNF815PA8K554 130 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 IGKCP01834 107 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 NPSP0C0P6 89 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 SRSF1Q07955 248 aaKnown RBP eCLIP6.3□□□□□ -1.4
COL21A1-203ENST00000370819 TPTE2P1Q5T6R2 138 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 OR5A1Q8NGJ0 315 aa6.3□□□□□ -1.4
COL21A1-203ENST00000370819 ANAPC10Q9UM13 185 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms