RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
HIPK1-205ENST00000369558 TRAV12-3A0A0B4J271 114 aa11.37□□□□□ -0.59
HIPK1-205ENST00000369558 NHP2Q9NX24 153 aaKnown RBP11.36□□□□□ -0.59
HIPK1-205ENST00000369558 AGMATQ9BSE5 352 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
HIPK1-205ENST00000369558 TRAV40A0A0B4J280 105 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 CD59P13987 128 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 CACNG7P62955 275 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 CRIM1Q9NZV1 1036 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 ZNRD1Q9P1U0 126 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 SOX21Q9Y651 276 aaPredicted RBP11.36□□□□□ -0.59
HIPK1-205ENST00000369558 SPCS1Q9Y6A9 102 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 TTC9CQ8N5M4 171 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 PSG8Q9UQ74 426 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 AMBPP02760 352 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 NMSQ5H8A3 153 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 NCR2O95944 276 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 TMEM256Q8N2U0 113 aa11.36□□□□□ -0.59
HIPK1-205ENST00000369558 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 RNASE6Q93091 150 aaKnown RBP11.35□□□□□ -0.59
HIPK1-205ENST00000369558 ALKBH7Q9BT30 221 aaPredicted RBP11.35□□□□□ -0.59
HIPK1-205ENST00000369558 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
HIPK1-205ENST00000369558 HIST3H2BBQ8N257 126 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 NUDT10Q8NFP7 164 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 QRFPP83859 136 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 FAM169BQ8N8A8 192 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 GNB1LQ9BYB4 327 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 SRRM5B3KS81 715 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 PSG1P11464 419 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
HIPK1-205ENST00000369558 NAA38Q9BRA0 125 aaKnown RBP11.35□□□□□ -0.59
HIPK1-205ENST00000369558 ANKHD1Q8IWZ3 2542 aaKnown RBP11.35□□□□□ -0.59
HIPK1-205ENST00000369558 TRGV2A0A075B6R0 118 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 A0A0G2JRQ6 117 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 FAM166AQ6J272 317 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 NEUROG1Q92886 237 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 NDPQ00604 133 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 MEGF9Q9H1U4 602 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 WDR83OSQ9Y284 106 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 IGHV2-26A0A0B4J1V2 119 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 LDLRAD2Q5SZI1 272 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 LCN12Q6JVE5 192 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 SPACA3Q8IXA5 215 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 NDUFAF3Q9BU61 184 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 MLANAQ16655 118 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 OSTCQ9NRP0 149 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 TMEM101Q96IK0 257 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 A0A1W2PRE2 83 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 PAPPA-AS1Q5QFB9 102 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 LINC01551Q86U37 167 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 C8orf46Q8TAG6 207 aa11.34□□□□□ -0.59
HIPK1-205ENST00000369558 NTF4P34130 210 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 ZNF585BQ52M93 769 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 IGHV4-39P01824 125 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.6
HIPK1-205ENST00000369558 Q6AWC8 147 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 IGFL4Q6B9Z1 124 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 Q6ZRM9 215 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 TRAV9-1A0A075B6T8 112 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 IGHV3-73A0A0B4J1V6 119 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 H7C1H1 209 aa11.33□□□□□ -0.6
HIPK1-205ENST00000369558 RPUSD1Q9UJJ7 312 aaKnown RBP11.33□□□□□ -0.6
HIPK1-205ENST00000369558 Q8TAT8 98 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 ZNF138P52744 262 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 SLC25A39Q9BZJ4 359 aaPredicted RBP11.32□□□□□ -0.6
HIPK1-205ENST00000369558 THBDP07204 575 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 ADCYAP1P18509 176 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 FHL1Q13642 323 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 TMEM95Q3KNT9 176 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
HIPK1-205ENST00000369558 ARHGAP32A7KAX9 2087 aa11.32□□□□□ -0.6
HIPK1-205ENST00000369558 HBDP02042 147 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 RIPPLY3P57055 190 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 TSKUQ8WUA8 353 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 TRAV9-2A0A087WT02 112 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 NPC2P61916 151 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 VCX2Q9H322 139 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 D6R8Y8 96 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 COPS9Q8WXC6 57 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 MBNL3Q9NUK0 354 aaKnown RBP11.31□□□□□ -0.6
HIPK1-205ENST00000369558 IGHV1-8P0DP01 117 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 Q6P435 159 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
HIPK1-205ENST00000369558 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
HIPK1-205ENST00000369558 C17orf82Q86X59 251 aaPredicted RBP11.3□□□□□ -0.6
HIPK1-205ENST00000369558 RSPO3Q9BXY4 272 aaPredicted RBP11.3□□□□□ -0.6
HIPK1-205ENST00000369558 A0A0G2JNJ9 132 aa11.3□□□□□ -0.6
HIPK1-205ENST00000369558 BRD3OSQ6XYD6 125 aa11.3□□□□□ -0.6
HIPK1-205ENST00000369558 ZNF524Q96C55 264 aa11.3□□□□□ -0.6
HIPK1-205ENST00000369558 Q9UFV3 132 aa11.3□□□□□ -0.6
HIPK1-205ENST00000369558 STAG3L3P0CL85 134 aa11.3□□□□□ -0.6
HIPK1-205ENST00000369558 PAX8Q06710 450 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms