RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SUB1P53999 127 aaKnown RBP eCLIP9.58□□□□□ -0.88
USF1-203ENST00000368021 PMS2P11Q13670 270 aa9.58□□□□□ -0.88
USF1-203ENST00000368021 ZNF562Q6V9R5 426 aa9.58□□□□□ -0.88
USF1-203ENST00000368021 PSMG3Q9BT73 122 aaPredicted RBP9.58□□□□□ -0.88
USF1-203ENST00000368021 VAMP8Q9BV40 100 aa9.58□□□□□ -0.88
USF1-203ENST00000368021 SH3BGRL3Q9H299 93 aa9.58□□□□□ -0.88
USF1-203ENST00000368021 UQCR10Q9UDW1 63 aa9.58□□□□□ -0.88
USF1-203ENST00000368021 UBE2L5PA0A1B0GUS4 154 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 MAP1LC3B2A6NCE7 125 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 TEX22C9J3V5 150 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 CRLF1O75462 422 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 GNB1P62873 340 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 Q8N9W7 124 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 TAF15Q92804 592 aaKnown RBP eCLIP9.57□□□□□ -0.88
USF1-203ENST00000368021 RPUSD4Q96CM3 377 aaKnown RBP9.57□□□□□ -0.88
USF1-203ENST00000368021 ANAPC16Q96DE5 110 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 MAP1LC3BQ9GZQ8 125 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 SLC45A2Q9UMX9 530 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 TIMM9Q9Y5J7 89 aa9.57□□□□□ -0.88
USF1-203ENST00000368021 MPDU1O75352 247 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 CNIH1O95406 144 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 FSHBP01225 129 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 IFNA1P01562 189 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 HLA-DRB1P01911 266 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 SRP14P37108 136 aaKnown RBP9.56□□□□□ -0.88
USF1-203ENST00000368021 TPPP2P59282 170 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 SERF2P84101 59 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 RUNX1Q01196 453 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 PVRIGQ6DKI7 326 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 KCNIP4Q6PIL6 250 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 TOMM20LQ6UXN7 152 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 CENPVQ7Z7K6 275 aaPredicted RBP9.56□□□□□ -0.88
USF1-203ENST00000368021 MTURNQ8N3F0 131 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 OR2G3Q8NGZ4 309 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 PLA2G2EQ9NZK7 142 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 FXYD3Q14802 87 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 PIFOQ8TCI5 191 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 CACNG8Q8WXS5 425 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 RNF2Q99496 336 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 NPVFQ9HCQ7 196 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 WDR83OSQ9Y284 106 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
USF1-203ENST00000368021 A0A1B0GV72 72 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 ZNF705FA8MVS1 300 aaPredicted RBP9.55□□□□□ -0.88
USF1-203ENST00000368021 ZNF705DP0CH99 300 aaPredicted RBP9.55□□□□□ -0.88
USF1-203ENST00000368021 ZNF705BP0CI00 300 aaPredicted RBP9.55□□□□□ -0.88
USF1-203ENST00000368021 CX3CL1P78423 397 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 TMEM41BQ5BJD5 291 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 C9orf139Q6ZV77 190 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 MS4A10Q96PG2 267 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 RSG1Q9BU20 258 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 NPCDR1Q9BY65 106 aa9.55□□□□□ -0.88
USF1-203ENST00000368021 MRPL27Q9P0M9 148 aaKnown RBP9.55□□□□□ -0.88
USF1-203ENST00000368021 MRPS16Q9Y3D3 137 aaKnown RBP9.55□□□□□ -0.88
USF1-203ENST00000368021 LSM4Q9Y4Z0 139 aaKnown RBP9.55□□□□□ -0.88
USF1-203ENST00000368021 CORTO00230 105 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 ESDP10768 282 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 AREGP15514 252 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 CNN1P51911 297 aaKnown RBP9.54□□□□□ -0.88
USF1-203ENST00000368021 CD69Q07108 199 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 ACTL10Q5JWF8 245 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 SSMEM1Q8WWF3 244 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 ARPC1AQ92747 370 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 RASL11BQ9BPW5 248 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 F11RQ9Y624 299 aaKnown RBP9.54□□□□□ -0.88
USF1-203ENST00000368021 IGHV7-81A0A0B4J1V7 117 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 C17orf112F2Z3M2 114 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 SRD5A1P18405 259 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 RHOGP84095 191 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 TMEM182Q6ZP80 229 aaPredicted RBP9.54□□□□□ -0.88
USF1-203ENST00000368021 TEX29Q8N6K0 151 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 TMEM160Q9NX00 188 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 MOB4Q9Y3A3 225 aa9.54□□□□□ -0.88
USF1-203ENST00000368021 CCL25O15444 150 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 REG1AP05451 166 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 OR5G3P0C626 314 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 ZNF343Q6P1L6 599 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 TEPPQ6URK8 271 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 TMEM144Q7Z5S9 345 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 ZNF709Q8N972 641 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 OR1L6Q8NGR2 347 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 RFNGQ9Y644 331 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 URGCP-MRPS24S4R325 110 aa9.53□□□□□ -0.88
USF1-203ENST00000368021 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
USF1-203ENST00000368021 NPIPB5A8MRT5 1133 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 ZNF727A8MUV8 499 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 CRYGCP07315 174 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 NDPQ00604 133 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 PRR27Q6MZM9 219 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 C16orf82Q7Z2V1 217 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 ATRQ13535 2644 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 A6NDX4 124 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 H3BUX3 64 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms