RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CENPVQ7Z7K6 275 aaPredicted RBP9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGF2RP11717 2491 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 TMEM50AO95807 157 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 HGFACQ04756 655 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 TDGF1P3P51864 188 aa9.71□□□□□ -0.86
CDC42BPA-202ENST00000366764 NTF4P34130 210 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 CLEC2AQ6UVW9 174 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 NUP35Q8NFH5 326 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 TMEM160Q9NX00 188 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 TOMM40O96008 361 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 PYYP10082 97 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 UBE2V1Q13404 147 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 C11orf52Q96A22 123 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 FBXL7Q9UJT9 491 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 PRSS8Q16651 343 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 FAM231DQ6ZW35 169 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 COQ2Q96H96 371 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 COL5A1P20908 1838 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 PAX9P55771 341 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 IFI27L1Q96BM0 104 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 LEPP41159 167 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 DMRTA2Q96SC8 542 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 PSG8Q9UQ74 426 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 SYS1-DBNDD2H3BUS1 97 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 TCRAP04437 139 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 GNG5P63218 68 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 LYPD6Q86Y78 171 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 FOXC2Q99958 501 aa9.7□□□□□ -0.86
CDC42BPA-202ENST00000366764 FAM159AQ6UWV7 190 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 CPAMD8Q8IZJ3 1885 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 A0A0G2JRQ6 117 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 Q6ZSR3 168 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 SSC4DQ8WTU2 575 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 SRSF1Q07955 248 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 ATP1A1-AS1Q5TC04 95 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 OR2K2Q8NGT1 345 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 MUC22E2RYF6 1773 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 NUP37Q8NFH4 326 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 E9PLN8 166 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 PRRC2CQ9Y520 2896 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 DYNLRB2Q8TF09 96 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 RNF138Q8WVD3 245 aa9.69□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGKV1D-33P01593 117 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGKV1-33P01594 117 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 CD177Q8N6Q3 437 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGHV1-46P01743 117 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 PLNP26678 52 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 PIMREGQ9BSJ6 248 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 H0YJW9 148 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 LDLRAD2Q5SZI1 272 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 CFHR2P36980 270 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 Q0VFX4 171 aa9.68□□□□□ -0.86
CDC42BPA-202ENST00000366764 ST6GALNAC6Q969X2 333 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 SLC25A15Q9Y619 301 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 A0A1B0GWJ7 208 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 HIVEP3Q5T1R4 2406 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 LIME1Q9H400 295 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 TMEM262E9PQX1 116 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGHG3P01860 377 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 ZNF581Q9P0T4 197 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 CA1P00915 261 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 PF4V1P10720 104 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 RSPO1Q2MKA7 263 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 RFNGQ9Y644 331 aa9.67□□□□□ -0.86
CDC42BPA-202ENST00000366764 RNASE2P10153 161 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 TTC32Q5I0X7 151 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 GEMIN7Q9H840 131 aaKnown RBP9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 J3KRW8 73 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 COX11Q9Y6N1 276 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 USP9XQ93008 2570 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 FAM27E3Q08E93 113 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 USP9YO00507 2555 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 IGKV1D-17A0A075B6S4 117 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 H3BUT2 72 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 MLNRO43193 412 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 CCL3L1P16619 93 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 PDLIM4P50479 330 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 SPATA31B1PQ5VZV4 182 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 VWC2Q2TAL6 325 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 DSCAML1Q8TD84 2053 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 ST6GALNAC3Q8NDV1 305 aa9.66□□□□□ -0.86
CDC42BPA-202ENST00000366764 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 OR10W1Q8NGF6 305 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 LILRA1O75019 489 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 PRSS2P07478 247 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 ZFYVE26Q68DK2 2539 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 LAGE3Q14657 143 aa9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 ZCCHC24Q8N2G6 241 aaKnown RBP9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 MBD3L4A6NDZ8 208 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-202ENST00000366764 MBD3L3A6NE82 208 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms