RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PPP1R27Q86WC6 154 aa11.38□□□□□ -0.59
NIPAL3-203ENST00000358028 LINC00469Q8N7U9 141 aa11.38□□□□□ -0.59
NIPAL3-203ENST00000358028 SMIM12Q96EX1 92 aa11.38□□□□□ -0.59
NIPAL3-203ENST00000358028 CHRDL1Q9BU40 450 aa11.38□□□□□ -0.59
NIPAL3-203ENST00000358028 TMUB1Q9BVT8 246 aa11.38□□□□□ -0.59
NIPAL3-203ENST00000358028 NAGKQ9UJ70 344 aa11.38□□□□□ -0.59
NIPAL3-203ENST00000358028 PEX7O00628 323 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 SCGB1D1O95968 90 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 AMY1AP04745 511 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 TMEM190Q8WZ59 177 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 FXYD5Q96DB9 178 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 RNF5Q99942 180 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 TP53TG3Q9ULZ0 132 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 CR1P17927 2039 aa11.37□□□□□ -0.59
NIPAL3-203ENST00000358028 GRIFINA4D1Z8 144 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 IZUMO1RA6ND01 250 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 TEX22C9J3V5 150 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 NUPR1O60356 82 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 MGST1P10620 155 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 TNFRSF19Q9NS68 423 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 MOSP00540 346 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 APELAP0DMC3 54 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 MYCNOSP40205 109 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 C1orf194Q5T5A4 169 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 RUSC1-AS1Q66K80 236 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 C19orf35Q6ZS72 473 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 BAGE3Q86Y29 109 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 BAGE2Q86Y30 109 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 Q96MF0 132 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 NAT8BQ9UHF3 227 aa11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 F11RQ9Y624 299 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-203ENST00000358028 A0A1B0GUS0 222 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 M0R1W7 72 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 SERF1AO75920 110 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 PYYP10082 97 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 LINC00310P59036 64 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 PLP1P60201 277 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 ARF6P62330 175 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 LDLRAD2Q5SZI1 272 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 LINC00305Q7Z4B0 112 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 OR11H6Q8NGC7 330 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 C2orf88Q9BSF0 95 aa11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 SSBP3Q9BWW4 388 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-203ENST00000358028 MALRD1Q5VYJ5 2156 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 KIR2DL5BA0A0G2JN68 375 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 KIR2DL5BA0A0G2JPC4 375 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 TIMM23O14925 209 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 HTR1DP28221 377 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 EFNA4P52798 201 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 FXYD3Q14802 87 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 TMEM183BQ1AE95 376 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 KIR2DL5AQ8N109 375 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 SRSF12Q8WXF0 261 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 GRAMD2BQ96HH9 432 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 NAV3Q8IVL0 2385 aa11.34□□□□□ -0.59
NIPAL3-203ENST00000358028 LOC105371242A0A075B767 164 aa11.33□□□□□ -0.59
NIPAL3-203ENST00000358028 HYPMO75409 117 aa11.33□□□□□ -0.59
NIPAL3-203ENST00000358028 BRS3P32247 399 aa11.33□□□□□ -0.59
NIPAL3-203ENST00000358028 PLGLAQ15195 96 aa11.33□□□□□ -0.59
NIPAL3-203ENST00000358028 SERTAD4Q9NUC0 356 aa11.33□□□□□ -0.59
NIPAL3-203ENST00000358028 DPM3Q9P2X0 92 aa11.33□□□□□ -0.59
NIPAL3-203ENST00000358028 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.59
NIPAL3-203ENST00000358028 IGHV3-21A0A0B4J1V1 117 aa11.33□□□□□ -0.6
NIPAL3-203ENST00000358028 CEACAM3P40198 252 aa11.33□□□□□ -0.6
NIPAL3-203ENST00000358028 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
NIPAL3-203ENST00000358028 CFHR4Q92496 578 aa11.33□□□□□ -0.6
NIPAL3-203ENST00000358028 ZNF331Q9NQX6 463 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-203ENST00000358028 EPDR1Q9UM22 224 aa11.33□□□□□ -0.6
NIPAL3-203ENST00000358028 POLR3KQ9Y2Y1 108 aaPredicted RBP11.33□□□□□ -0.6
NIPAL3-203ENST00000358028 ODF3BA8MYP8 253 aa11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 HIST1H1EP10412 219 aaKnown RBP11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 ORM2P19652 201 aa11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 KLRD1Q13241 179 aa11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 USF2Q15853 346 aaPredicted RBP11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 Q6ZWC4 215 aa11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 SAMD10Q9BYL1 202 aa11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 GNB4Q9HAV0 340 aa11.32□□□□□ -0.6
NIPAL3-203ENST00000358028 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 PRTN3P24158 256 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 UBE2G1P62253 170 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 MMDQ15546 238 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 TEX43Q6ZNM6 134 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 CIARTQ8N365 385 aaPredicted RBP11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 SIGLECL1Q8N7X8 197 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 NSD1Q96L73 2696 aaPredicted RBP11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 IGHV4-30-2A0A087WSY4 118 aa11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
NIPAL3-203ENST00000358028 NBR2O15453 112 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms