RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 CFHR5Q9BXR6 569 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 PLSCR4Q9NRQ2 329 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 TET1Q8NFU7 2136 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 CREBBPQ92793 2442 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 PRTN3P24158 256 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.57□□□□□ -0.883e-7■■■■□ 21.8
SPTBN1-202ENST00000356805 C12orf77C9JDV5 145 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 RAMP3O60896 148 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 LAGE3Q14657 143 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 SLC50A1Q9BRV3 221 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 ABCA4P78363 2273 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 TRAV40A0A0B4J280 105 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 F8W1H4 67 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 TNFRSF6BO95407 300 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 SPTAN1Q13813 2472 aaKnown RBP9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 KIR3DS1Q14943 382 aa9.57□□□□□ -0.88
SPTBN1-202ENST00000356805 LTBP4Q8N2S1 1624 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 RSPO3Q9BXY4 272 aaPredicted RBP9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 LINC00527Q9UJ94 153 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 TRGV1A0A0A0MS02 117 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 PVRIGQ6DKI7 326 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 C1QL2Q7Z5L3 287 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 IMMP1LQ96LU5 166 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 KLF12Q9Y4X4 402 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 COL18A1P39060 1754 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 PAX8Q06710 450 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 ZNF474Q6S9Z5 364 aaPredicted RBP9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 BRCA1P38398 1863 aaKnown RBP9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 C15orf61A6NNL5 157 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 CCL3L1P16619 93 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 RNF125Q96EQ8 232 aa9.56□□□□□ -0.88
SPTBN1-202ENST00000356805 TMEM219Q86XT9 240 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 NHSL1Q5SYE7 1610 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 CD55P08174 381 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 PSG1P11464 419 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 IGHV1-2P23083 117 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 C10orf91Q5T1B1 145 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 GUSBP1Q15486 140 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 EFNB3Q15768 340 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 LINC00312Q9Y6C7 94 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 NPIPB5A8MRT5 1133 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 MRAPQ8TCY5 172 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 C1QTNF5Q9BXJ0 243 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 ATP6V0BQ99437 205 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 ANAPC10Q9UM13 185 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 LCTP09848 1927 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 C1orf53Q5VUE5 145 aa9.55□□□□□ -0.88
SPTBN1-202ENST00000356805 GREM1O60565 184 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 PYYP10082 97 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 MESP2Q0VG99 397 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 TFF1P04155 84 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 ERCC8Q13216 396 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 DTX1Q86Y01 620 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 SNHG12Q9BXW3 62 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 PLEKHB2Q96CS7 222 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 SLX1AQ9BQ83 275 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 C17orf100A8MU93 164 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 LYNX1G3V0Z9 82 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 LEPROTO15243 131 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 IGHV2-5P01817 119 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 LYNX1P0DP58 116 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 LY6DQ14210 128 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 YPEL1O60688 119 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 YPEL2Q96QA6 119 aa9.54□□□□□ -0.88
SPTBN1-202ENST00000356805 EREGO14944 169 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 MLNRO43193 412 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 RBMY1FQ15415 496 aaKnown RBP9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 ZCCHC24Q8N2G6 241 aaKnown RBP9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 CDKN1BP46527 198 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 PMVKQ15126 192 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 GFRA4Q9GZZ7 299 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 DEPPQ9NTK1 212 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 WNT2P09544 360 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 INAFM2P0DMQ5 153 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 PPDPFLQ8WWR9 84 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 CGB3P0DN86 165 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 ADAMTSL5Q6ZMM2 481 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 NEUROG3Q9Y4Z2 214 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 COL6A6A6NMZ7 2263 aa9.53□□□□□ -0.88
SPTBN1-202ENST00000356805 SLC25A39Q9BZJ4 359 aaPredicted RBP9.52□□□□□ -0.88
SPTBN1-202ENST00000356805 WFDC1Q9HC57 220 aa9.52□□□□□ -0.88
SPTBN1-202ENST00000356805 FNDC10F2Z333 226 aa9.52□□□□□ -0.88
SPTBN1-202ENST00000356805 PRDM6Q9NQX0 595 aa9.52□□□□□ -0.88
SPTBN1-202ENST00000356805 FAM231BA6NCW3 169 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 CFPP27918 469 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 FAM90A2PQ658T7 463 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 LSM4Q9Y4Z0 139 aaKnown RBP9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 PSG7Q13046 419 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 GAGE2AQ6NT46 116 aa9.52□□□□□ -0.89
SPTBN1-202ENST00000356805 THBDP07204 575 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms