RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SLC25A39Q9BZJ4 359 aaPredicted RBP5.42□□□□□ -1.54
TRIM55-203ENST00000350034 BEX4Q9NWD9 120 aaPredicted RBP5.42□□□□□ -1.54
TRIM55-203ENST00000350034 C21orf62Q9NYP8 219 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 THYN1Q9P016 225 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 HIGD1AQ9Y241 93 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 MOB4Q9Y3A3 225 aa5.42□□□□□ -1.54
TRIM55-203ENST00000350034 NOTCH1P46531 2555 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 IGHV3OR16-10A0A075B7F0 116 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 A1L4Q6 167 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 A6NDX4 124 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 HELTA6NFD8 242 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 PGPEP1LA6NFU8 196 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 LINC01548A6NM66 108 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 J3QLI3 93 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 K7EN84 100 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 MRPS12O15235 138 aaKnown RBP5.41□□□□□ -1.54
TRIM55-203ENST00000350034 GNG7O60262 68 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 OR2J3O76001 311 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 BRI3O95415 125 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 AVPP01185 164 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 GCGP01275 180 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 IGLV2-8P01709 118 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 TYMSP04818 313 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 NBEAP1P0C6P0 100 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 HIST1H1EP10412 219 aaKnown RBP5.41□□□□□ -1.54
TRIM55-203ENST00000350034 RPS10P46783 165 aaKnown RBP5.41□□□□□ -1.54
TRIM55-203ENST00000350034 GALR1P47211 349 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 KRTAP10-9P60411 292 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 LYZP61626 148 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 LOXL1Q08397 574 aaPredicted RBP5.41□□□□□ -1.54
TRIM55-203ENST00000350034 TEX38Q6PEX7 206 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 UNQ5815/PRO19632Q6UWF5 114 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 BRD3OSQ6XYD6 125 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 ZFP82Q8N141 532 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 LRRC75A-AS1Q8N1F1 130 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 LINC01356Q8N9X3 169 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 OR5T1Q8NG75 326 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF502Q8TBZ5 544 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 IGF2BP2-AS1Q96M15 143 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 C7orf69Q9H7B7 122 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 BIN3Q9NQY0 253 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 FBXL7Q9UJT9 491 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 CDC42EP3Q9UKI2 254 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 KLF12Q9Y4X4 402 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 URGCP-MRPS24S4R325 110 aa5.41□□□□□ -1.54
TRIM55-203ENST00000350034 CCDC168Q8NDH2 2452 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 C5orf52A6NGY3 159 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 PEX7O00628 323 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 CTSGP08311 255 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 ADMP35318 185 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 FOXL1Q12952 345 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 CENPWQ5EE01 88 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF600Q6ZNG1 722 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 OR10G8Q8NGN5 311 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 RNF125Q96EQ8 232 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 SFRP2Q96HF1 295 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 OR5B12Q96R08 314 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 ATP6V0BQ99437 205 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 SRD5A3Q9H8P0 318 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 HIF1ANQ9NWT6 349 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 AURKAIP1Q9NWT8 199 aaPredicted RBP5.4□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF586Q9NXT0 402 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 EPDR1Q9UM22 224 aa5.4□□□□□ -1.54
TRIM55-203ENST00000350034 SOX21Q9Y651 276 aaPredicted RBP5.4□□□□□ -1.54
TRIM55-203ENST00000350034 AKAP9Q99996 3911 aa5.4□□□□□ -1.55
TRIM55-203ENST00000350034 TRAV9-1A0A075B6T8 112 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 MDFIC2A0A1B0GVS7 189 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 PGPA6NDG6 321 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 SH2D7A6NKC9 451 aaPredicted RBP5.39□□□□□ -1.55
TRIM55-203ENST00000350034 G3V318 75 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 M0QZK8 103 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 FSHBP01225 129 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 IGF1P05019 195 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 IGLC2P0DOY2 106 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 S100PP25815 95 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 GNG4P50150 75 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 CNN1P51911 297 aaKnown RBP5.39□□□□□ -1.55
TRIM55-203ENST00000350034 RHOGP84095 191 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 USF2Q15853 346 aaPredicted RBP5.39□□□□□ -1.55
TRIM55-203ENST00000350034 TMEM183BQ1AE95 376 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 DEFB113Q30KQ7 82 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 Q56UQ5 140 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 LEMD1Q68G75 181 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 TMEM219Q86XT9 240 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 C5orf17Q8NAS9 161 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 NECAP1Q8NC96 275 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 SPATA3Q8NHX4 192 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 MBD6Q96DN6 1003 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 TMUB1Q9BVT8 246 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 OTORQ9NRC9 128 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 OSTCQ9NRP0 149 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 GAR1Q9NY12 217 aaKnown RBP5.39□□□□□ -1.55
TRIM55-203ENST00000350034 ZNF580Q9UK33 172 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 RNF24Q9Y225 148 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 S4R3C0 116 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 V9GYV3 84 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 MED13LQ71F56 2210 aa5.39□□□□□ -1.55
TRIM55-203ENST00000350034 TRBV19A0A075B6N1 114 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 TRAV41A0A0B4J266 112 aa5.38□□□□□ -1.55
TRIM55-203ENST00000350034 TRBV6-1A0A0K0K1D8 114 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms