RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 THYN1Q9P016 225 aa16.02■□□□□ 0.15
CHRNA3-202ENST00000348639 CENPVL3A0A0U1RRI6 287 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 GNG7O60262 68 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 GNG5P63218 68 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 IBA57Q5T440 356 aaKnown RBP16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 BAGE2Q86Y30 109 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 TMEM183AQ8IXX5 376 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 C10orf105Q8TEF2 133 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 SPOCK3Q9BQ16 436 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 SHANK2-AS3Q9BTD1 123 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 KLF12Q9Y4X4 402 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 ZNF462Q96JM2 2506 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 SPG11Q96JI7 2443 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 TRAV34A0A0B4J273 112 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 XKRY2A2RUG3 117 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 NDUFS8O00217 210 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 HIST1H1EP10412 219 aaKnown RBP16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 PDZD11Q5EBL8 140 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 C5orf17Q8NAS9 161 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 RNF125Q96EQ8 232 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 TMEM68Q96MH6 324 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 Q9H3A6 140 aa16.01■□□□□ 0.15
CHRNA3-202ENST00000348639 WI2-2373I1.2A0A1W2PRP0 233 aa16■□□□□ 0.15
CHRNA3-202ENST00000348639 S4R3C0 116 aa16■□□□□ 0.15
CHRNA3-202ENST00000348639 VWC2LB2RUY7 222 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 F8W735 103 aaPredicted RBP15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 H3BRN7 92 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 ZNF843Q8N446 348 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 NHLRC2Q8NBF2 726 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 ATG101Q9BSB4 218 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 C21orf62Q9NYP8 219 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 KMT2BQ9UMN6 2715 aaPredicted RBP15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 IGHV3OR16-10A0A075B7F0 116 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 IL4P05112 153 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 UBE2G1P62253 170 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 NRGNQ92686 78 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 SMIM12Q96EX1 92 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 HSPB9Q9BQS6 159 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 ZNF586Q9NXT0 402 aa15.99■□□□□ 0.15
CHRNA3-202ENST00000348639 MAP1AP78559 2803 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-202ENST00000348639 NDUFB8O95169 186 aa15.98■□□□□ 0.15
CHRNA3-202ENST00000348639 FAM231DQ6ZW35 169 aa15.98■□□□□ 0.15
CHRNA3-202ENST00000348639 OR8I2Q8N0Y5 310 aa15.98■□□□□ 0.15
CHRNA3-202ENST00000348639 OR10D4PQ8NGN7 298 aa15.98■□□□□ 0.15
CHRNA3-202ENST00000348639 OTORQ9NRC9 128 aa15.98■□□□□ 0.15
CHRNA3-202ENST00000348639 IGHV4-30-2A0A087WSY4 118 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 H3BTX0 84 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 Q56UQ5 140 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 BPIFA4PQ86YQ2 179 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 RNF24Q9Y225 148 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 CELSR1Q9NYQ6 3014 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 ABCA2Q9BZC7 2435 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 ZFHX3Q15911 3703 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 OR2J3O76001 311 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 FABP4P15090 132 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 S100A7AQ86SG5 101 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 NIT2Q9NQR4 276 aa15.97■□□□□ 0.15
CHRNA3-202ENST00000348639 SMIM27A0A1W2PRY6 76 aa15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 TCRAP04437 139 aa15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 RPL19P84098 196 aaKnown RBP15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 FAM110DQ8TAY7 271 aaPredicted RBP15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 TMEM190Q8WZ59 177 aa15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 FMC1Q96HJ9 113 aa15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 HIST1H2BLQ99880 126 aa15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 CELSR2Q9HCU4 2923 aa15.96■□□□□ 0.15
CHRNA3-202ENST00000348639 ZNF705GA8MUZ8 300 aaPredicted RBP15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 GPR82Q96P67 336 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 SERTAD4Q9NUC0 356 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 CBLN1P23435 193 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 FCGR2BP31994 310 aaPredicted RBP15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 KLK9Q2XQG4 91 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 PYY3Q5JQD4 70 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 OR4F17Q8NGA8 305 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 TXN2Q99757 166 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 C7orf69Q9H7B7 122 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 FBXL7Q9UJT9 491 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 KLK9Q9UKQ9 250 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 RPH3ALQ9UNE2 315 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 CSMD2Q7Z408 3487 aa15.95■□□□□ 0.14
CHRNA3-202ENST00000348639 TRBV19A0A075B6N1 114 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 TRBV9A0A0B4J1U6 114 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 IGHV1-69DA0A0B4J2H0 117 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 A1L4Q6 167 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 SCGB2A1O75556 95 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 IGHV1-69P01742 117 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 IGLC2P0DOY2 106 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 ADMP35318 185 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 USF2Q15853 346 aaPredicted RBP15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 TMUB1Q9BVT8 246 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 ATP6V0E1O15342 81 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 S100A12P80511 92 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 UNQ5815/PRO19632Q6UWF5 114 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 BRD3OSQ6XYD6 125 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 VN1R17PQ8TDU5 208 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 MLST8Q9BVC4 326 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 GNB1LQ9BYB4 327 aa15.94■□□□□ 0.14
CHRNA3-202ENST00000348639 TRAV40A0A0B4J280 105 aa15.93■□□□□ 0.14
CHRNA3-202ENST00000348639 MRPS12O15235 138 aaKnown RBP15.93■□□□□ 0.14
CHRNA3-202ENST00000348639 LTAP01374 205 aa15.93■□□□□ 0.14
CHRNA3-202ENST00000348639 IER3P46695 156 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms