RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 CTSGP08311 255 aa17.56■□□□□ 0.4
TNFRSF10B-202ENST00000347739 ZNF329Q86UD4 541 aa17.56■□□□□ 0.4
TNFRSF10B-202ENST00000347739 Q96MF0 132 aa17.56■□□□□ 0.4
TNFRSF10B-202ENST00000347739 GAR1Q9NY12 217 aaKnown RBP17.56■□□□□ 0.4
TNFRSF10B-202ENST00000347739 MLXQ9UH92 298 aa17.56■□□□□ 0.4
TNFRSF10B-202ENST00000347739 HELTA6NFD8 242 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 OR2T8A6NH00 312 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 FLI1Q01543 452 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 LEMD1Q68G75 181 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 POLQO75417 2590 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 H7BYZ3 331 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 IGHV3-23P01764 117 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 ZNF600Q6ZNG1 722 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 OCC1Q8TAD7 63 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 URGCP-MRPS24S4R325 110 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 APCP25054 2843 aa17.55■□□□□ 0.4
TNFRSF10B-202ENST00000347739 PGPEP1LA6NFU8 196 aa17.54■□□□□ 0.4
TNFRSF10B-202ENST00000347739 BRI3O95415 125 aa17.54■□□□□ 0.4
TNFRSF10B-202ENST00000347739 USF2Q15853 346 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF10B-202ENST00000347739 C9orf139Q6ZV77 190 aa17.54■□□□□ 0.4
TNFRSF10B-202ENST00000347739 ATP6V0BQ99437 205 aa17.54■□□□□ 0.4
TNFRSF10B-202ENST00000347739 PPP1R2P9O14990 202 aa17.53■□□□□ 0.4
TNFRSF10B-202ENST00000347739 HIST1H1EP10412 219 aaKnown RBP17.53■□□□□ 0.4
TNFRSF10B-202ENST00000347739 ADMP35318 185 aa17.53■□□□□ 0.4
TNFRSF10B-202ENST00000347739 DEFB112Q30KQ8 113 aa17.53■□□□□ 0.4
TNFRSF10B-202ENST00000347739 TMEM190Q8WZ59 177 aa17.53■□□□□ 0.4
TNFRSF10B-202ENST00000347739 RNF24Q9Y225 148 aa17.53■□□□□ 0.4
TNFRSF10B-202ENST00000347739 TRBV7-1A0A0A6YYK4 115 aa17.52■□□□□ 0.4
TNFRSF10B-202ENST00000347739 CXCL1P09341 107 aa17.52■□□□□ 0.4
TNFRSF10B-202ENST00000347739 C9orf152Q5JTZ5 239 aa17.52■□□□□ 0.4
TNFRSF10B-202ENST00000347739 BPIFA4PQ86YQ2 179 aa17.52■□□□□ 0.4
TNFRSF10B-202ENST00000347739 BLNKQ8WV28 456 aa17.52■□□□□ 0.4
TNFRSF10B-202ENST00000347739 CHRDL1Q9BU40 450 aa17.52■□□□□ 0.4
TNFRSF10B-202ENST00000347739 TRBV24-1A0A075B6N3 115 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 MDFIC2A0A1B0GVS7 189 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 FAM223BA6NKX1 122 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 GNG4P50150 75 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 RANP62826 216 aaKnown RBP17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 CENPWQ5EE01 88 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 FAM223AQ8IWN6 122 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 EEF1AKMT3Q96AZ1 226 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 SFRP2Q96HF1 295 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 AURKAIP1Q9NWT8 199 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 CDC42EP3Q9UKI2 254 aa17.52■□□□□ 0.39
TNFRSF10B-202ENST00000347739 TGIF2-C20orf24A0A0A6YYL0 155 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 C1orf196B1AJZ1 125 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 H3BUA1 57 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 PEX7O00628 323 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 PFN1P07737 140 aaKnown RBP17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 TAS2R60P59551 318 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 C1QL4Q86Z23 238 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 IGF2BP2-AS1Q96M15 143 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 CCDC140Q96MF4 163 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 OR5B12Q96R08 314 aa17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 PRRC2AP48634 2157 aaKnown RBP17.51■□□□□ 0.39
TNFRSF10B-202ENST00000347739 NAV2Q8IVL1 2488 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 ZNF98A6NK75 572 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 GPR183P32249 361 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 GALR1P47211 349 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 RAB5BP61020 215 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 BCL6BQ8N143 479 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 ZNF586Q9NXT0 402 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 ZNF580Q9UK33 172 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 ABCA12Q86UK0 2595 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 ZFHX3Q15911 3703 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 K7EN84 100 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 CNN1P51911 297 aaKnown RBP17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 TEX38Q6PEX7 206 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 ZNF414Q96IQ9 312 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 EPDR1Q9UM22 224 aa17.5■□□□□ 0.39
TNFRSF10B-202ENST00000347739 PGPA6NDG6 321 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 MRPS12O15235 138 aaKnown RBP17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 CLEC3BP05452 202 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 IGLC2P0DOY2 106 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 S100PP25815 95 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 PPIFP30405 207 aaKnown RBP17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 S100A7P31151 101 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 SRP14P37108 136 aaKnown RBP17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 IER3P46695 156 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 CYB5R2Q6BCY4 276 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 C5orf17Q8NAS9 161 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 OR4F17Q8NGA8 305 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 OR5R1Q8NH85 324 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 MS4A10Q96PG2 267 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 IMMP2LQ96T52 175 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 PYGO2Q9BRQ0 406 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 Q9H3A6 140 aa17.49■□□□□ 0.39
TNFRSF10B-202ENST00000347739 AP4M1O00189 453 aa17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 IGHV4-59P01825 116 aa17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 SLC25A5P05141 298 aaKnown RBP17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 SNRPCP09234 159 aaKnown RBP17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 BLCAPP62952 87 aa17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 ATP5G2Q06055 141 aa17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 HIST2H2BCQ6DN03 193 aa17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 OTORQ9NRC9 128 aa17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 LINC00527Q9UJ94 153 aa17.48■□□□□ 0.39
TNFRSF10B-202ENST00000347739 TRBV19A0A075B6N1 114 aa17.47■□□□□ 0.39
TNFRSF10B-202ENST00000347739 BMPR1BO00238 502 aa17.47■□□□□ 0.39
TNFRSF10B-202ENST00000347739 FAM210BQ96KR6 192 aa17.47■□□□□ 0.39
TNFRSF10B-202ENST00000347739 RABAC1Q9UI14 185 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms