RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 VPS25Q9BRG1 176 aa7.32□□□□□ -1.24
ATG4A-202ENST00000345734 ALKBH7Q9BT30 221 aaPredicted RBP7.32□□□□□ -1.24
ATG4A-202ENST00000345734 ZANQ9Y493 2812 aa7.32□□□□□ -1.24
ATG4A-202ENST00000345734 IGKV1D-37A0A075B6S9 117 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 SERTM2A0A1B0GWG4 89 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 PPP5D1E7EU14 171 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 PAGE4O60829 102 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 NDUFA3O95167 84 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 OR2C1O95371 312 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 CNIH1O95406 144 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 STAG3L2P0CL84 134 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 GYPEP15421 78 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 PSMB3P49720 205 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 PTTG1IPP53801 180 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 UBE2G2P60604 165 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 RANP62826 216 aaKnown RBP7.31□□□□□ -1.24
ATG4A-202ENST00000345734 MEF2BQ02080 365 aaPredicted RBP7.31□□□□□ -1.24
ATG4A-202ENST00000345734 FAM120AOSQ5T036 256 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 PVRIGQ6DKI7 326 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 CCDC144NLQ6NUI1 221 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 OR2T10Q8NGZ9 312 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 RNF24Q9Y225 148 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 COX6B1P14854 86 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 SAA4P35542 130 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 RHOBP62745 196 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 ZNF90Q03938 601 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 C5orf64Q2M2E5 130 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 ZNF674Q2M3X9 581 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 MIR17HGQ75NE6 70 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 Q8N6K4 173 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 OR4F5Q8NH21 305 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 OR4F4Q96R69 305 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 SLC25A33Q9BSK2 321 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 FAM103A1Q9BTL3 118 aaKnown RBP7.31□□□□□ -1.24
ATG4A-202ENST00000345734 MANBALQ9NQG1 85 aa7.31□□□□□ -1.24
ATG4A-202ENST00000345734 IGHV3OR16-10A0A075B7F0 116 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 XKRY2A2RUG3 117 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 NCBP2LA6PVI3 153 aaKnown RBP7.3□□□□□ -1.24
ATG4A-202ENST00000345734 OOSP1A8MZH6 123 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 TOMM40O96008 361 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 RND2P52198 227 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 PAX8Q06710 450 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 FXYD3Q14802 87 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 RNF151Q2KHN1 245 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 TMEM249Q2WGJ8 235 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 COA6Q5JTJ3 125 aaKnown RBP7.3□□□□□ -1.24
ATG4A-202ENST00000345734 FAM78BQ5VT40 261 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 CYP2G1PQ6ZSU1 146 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 RNF152Q8N8N0 203 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 OR1P1Q8NH06 330 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 TBL2Q9Y4P3 447 aaKnown RBP7.3□□□□□ -1.24
ATG4A-202ENST00000345734 F11RQ9Y624 299 aaKnown RBP7.3□□□□□ -1.24
ATG4A-202ENST00000345734 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.3□□□□□ -1.24
ATG4A-202ENST00000345734 KMT2BQ9UMN6 2715 aaPredicted RBP7.3□□□□□ -1.24
ATG4A-202ENST00000345734 CENPVL3A0A0U1RRI6 287 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 CXorf1O96002 111 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 CRYGCP07315 174 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 UBE2V1Q13404 147 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 EBI3Q14213 229 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 LINC01551Q86U37 167 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 THAP8Q8NA92 274 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 TMEM37Q8WXS4 190 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 NIPSNAP3BQ9BS92 247 aa7.3□□□□□ -1.24
ATG4A-202ENST00000345734 CSPG4Q6UVK1 2322 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 C11orf94C9JXX5 98 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 NPFFO15130 113 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 MT-CO2P00403 227 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 GCHFRP30047 84 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 ATP5G3P48201 142 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 NDPQ00604 133 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 CST9LP1Q5W188 147 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 RPUSD4Q96CM3 377 aaKnown RBP7.29□□□□□ -1.24
ATG4A-202ENST00000345734 TVP23CQ96ET8 276 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 C20orf144Q9BQM9 153 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 FUT9Q9Y231 359 aa7.29□□□□□ -1.24
ATG4A-202ENST00000345734 APCP25054 2843 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 TCRBV4S1A1TA0A5B7 111 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 PSMB11A5LHX3 300 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 ZNF727A8MUV8 499 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 OR5G3P0C626 314 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 NPPCP23582 126 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 TAGLN2P37802 199 aaKnown RBP7.28□□□□□ -1.24
ATG4A-202ENST00000345734 MORN5Q5VZ52 161 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 ZNF48Q96MX3 618 aaPredicted RBP7.28□□□□□ -1.24
ATG4A-202ENST00000345734 AURKAIP1Q9NWT8 199 aaPredicted RBP7.28□□□□□ -1.24
ATG4A-202ENST00000345734 DOPEY2Q9Y3R5 2298 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 PRSS29PA6NIE9 313 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 SCGB1A1P11684 91 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 KRTAP10-9P60411 292 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 CX3CL1P78423 397 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 KLF17Q5JT82 389 aaPredicted RBP7.28□□□□□ -1.24
ATG4A-202ENST00000345734 ASPHD1Q5U4P2 390 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 GFI1BQ5VTD9 330 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 OR51G1Q8NGK1 321 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 ZNF503Q96F45 646 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 SMIM7Q9BQ49 75 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 TNFRSF19Q9NS68 423 aa7.28□□□□□ -1.24
ATG4A-202ENST00000345734 YTHDF2Q9Y5A9 579 aaKnown RBP7.28□□□□□ -1.24
ATG4A-202ENST00000345734 ZNF469Q96JG9 3925 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-202ENST00000345734 TRAV5A0A0B4J249 113 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms