RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LYPD1Q8N2G4 141 aa14.82□□□□□ -0.04
SMC4-201ENST00000344722 ZNF562Q6V9R5 426 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 TMEM133Q9H2Q1 129 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 MPDZO75970 2070 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 CASP8AP2Q9UKL3 1982 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 PSMB11A5LHX3 300 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 RRN3P1Q2M238 152 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 TRGV3P03979 118 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 CNTFRP26992 372 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 FAM231DQ6ZW35 169 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 Q86TA4 180 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 TMEM167AQ8TBQ9 72 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 MLNRO43193 412 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 PYGO2Q9BRQ0 406 aa14.81□□□□□ -0.04
SMC4-201ENST00000344722 M0R2P5 195 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 SH2D1AO60880 128 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 CSRP1P21291 193 aaKnown RBP14.8□□□□□ -0.04
SMC4-201ENST00000344722 TMEM158Q8WZ71 300 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 TMEM101Q96IK0 257 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 TSC2P49815 1807 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 TRAV12-3A0A0B4J271 114 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 TRBV7-9A0A0J9YWB2 115 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 IGLC7A0M8Q6 106 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 SRSF6Q13247 344 aaKnown RBP14.8□□□□□ -0.04
SMC4-201ENST00000344722 CLEC19AQ6UXS0 136 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 RBMY1BA6NDE4 496 aaKnown RBP14.8□□□□□ -0.04
SMC4-201ENST00000344722 RBMY1EA6NEQ0 496 aaKnown RBP14.8□□□□□ -0.04
SMC4-201ENST00000344722 RBMY1DP0C7P1 496 aaKnown RBP14.8□□□□□ -0.04
SMC4-201ENST00000344722 RBMY1A1P0DJD3 496 aaKnown RBP14.8□□□□□ -0.04
SMC4-201ENST00000344722 RBMY1CP0DJD4 496 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 SLAQ13239 276 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 UNQ6494/PRO21346Q6UXR6 183 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 LHFPL4Q7Z7J7 247 aa14.8□□□□□ -0.04
SMC4-201ENST00000344722 C17orf100A8MU93 164 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 APOBEC3AP31941 199 aaPredicted RBP14.79□□□□□ -0.04
SMC4-201ENST00000344722 IGHV3OR16-8A0A075B7F1 116 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 WIPF3A6NGB9 483 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 IGHV1-24A0A0C4DH33 117 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 ZNF114Q8NC26 417 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 LINC00479Q96M42 142 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 PTPRDP23468 1912 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 IGKV2-40A0A087WW87 121 aaPredicted RBP14.79□□□□□ -0.04
SMC4-201ENST00000344722 IGKV2D-40P01614 121 aaPredicted RBP14.79□□□□□ -0.04
SMC4-201ENST00000344722 VDAC2P45880 294 aaPredicted RBP14.79□□□□□ -0.04
SMC4-201ENST00000344722 CD177Q8N6Q3 437 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 TNFRSF14Q92956 283 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 A0A1W2PPM0 123 aa14.79□□□□□ -0.04
SMC4-201ENST00000344722 CCL21O00585 134 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 CCL25O15444 150 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 RNASE2P10153 161 aaKnown RBP14.78□□□□□ -0.04
SMC4-201ENST00000344722 C10orf55Q5SWW7 151 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 ATP1A1-AS1Q5TC04 95 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 AMN1Q8IY45 258 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 NUP37Q8NFH4 326 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 EPOPA6NHQ4 379 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 C2orf82Q6UX34 121 aa14.78□□□□□ -0.04
SMC4-201ENST00000344722 MBNL3Q9NUK0 354 aaKnown RBP14.78□□□□□ -0.04
SMC4-201ENST00000344722 FOXG1P55316 489 aaPredicted RBP14.77□□□□□ -0.04
SMC4-201ENST00000344722 C11orf52Q96A22 123 aa14.77□□□□□ -0.04
SMC4-201ENST00000344722 SLC25A15Q9Y619 301 aa14.77□□□□□ -0.04
SMC4-201ENST00000344722 IGKV3-20P01619 116 aa14.77□□□□□ -0.04
SMC4-201ENST00000344722 DUX5Q96PT3 197 aa14.77□□□□□ -0.04
SMC4-201ENST00000344722 LSM4Q9Y4Z0 139 aaKnown RBP14.77□□□□□ -0.04
SMC4-201ENST00000344722 DOCK3Q8IZD9 2030 aa14.77□□□□□ -0.05
SMC4-201ENST00000344722 GAGE12HA6NDE8 117 aa14.77□□□□□ -0.05
SMC4-201ENST00000344722 PLEKHB2Q96CS7 222 aa14.77□□□□□ -0.05
SMC4-201ENST00000344722 DOCK6Q96HP0 2047 aa14.77□□□□□ -0.05
SMC4-201ENST00000344722 PRR19A6NJB7 356 aa14.76□□□□□ -0.05
SMC4-201ENST00000344722 IGHV2-70DA0A0C4DH43 119 aa14.76□□□□□ -0.05
SMC4-201ENST00000344722 LGALS9BQ3B8N2 356 aa14.76□□□□□ -0.05
SMC4-201ENST00000344722 LGALS9CQ6DKI2 356 aa14.76□□□□□ -0.05
SMC4-201ENST00000344722 ZNF48Q96MX3 618 aaPredicted RBP14.76□□□□□ -0.05
SMC4-201ENST00000344722 KLF12Q9Y4X4 402 aa14.76□□□□□ -0.05
SMC4-201ENST00000344722 SPAARA0A1B0GVQ0 90 aa14.76□□□□□ -0.05
SMC4-201ENST00000344722 MYOD1P15172 320 aa14.76□□□□□ -0.05
SMC4-201ENST00000344722 IGKV1-39P01597 117 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 IGKV1D-39P04432 117 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 ARMS2P0C7Q2 107 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 FAM27E3Q08E93 113 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 C9orf106Q8NAJ2 232 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 IGHV3OR16-12A0A075B7B8 117 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 IGHV1-18A0A0C4DH31 117 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 PINLYPA6NC86 204 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 TNFRSF6BO95407 300 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 SP9P0CG40 484 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 SIVA1O15304 175 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 HAPLN4Q86UW8 402 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 METRNQ9UJH8 293 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 PPDPFLQ8WWR9 84 aa14.75□□□□□ -0.05
SMC4-201ENST00000344722 CD7P09564 240 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 RCHY1Q96PM5 261 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 RALGAPA1Q6GYQ0 2036 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 AZU1P20160 251 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.74□□□□□ -0.05
SMC4-201ENST00000344722 LINC00205P59089 165 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 TRBV20-1A0A075B6N2 111 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 H0YJW9 148 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 CD28P10747 220 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 CFHR1Q03591 330 aa14.74□□□□□ -0.05
SMC4-201ENST00000344722 IGKV3OR2-268A0A0C4DH90 116 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms