RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 LINC00587B1AMM8 73 aa14.68□□□□□ -0.06
HOXA9-201ENST00000343483 HYPMO75409 117 aa14.68□□□□□ -0.06
HOXA9-201ENST00000343483 TIGITQ495A1 244 aa14.68□□□□□ -0.06
HOXA9-201ENST00000343483 CDPF1Q6NVV7 123 aa14.68□□□□□ -0.06
HOXA9-201ENST00000343483 Q8N9W7 124 aa14.68□□□□□ -0.06
HOXA9-201ENST00000343483 SPG11Q96JI7 2443 aa14.68□□□□□ -0.06
HOXA9-201ENST00000343483 NPIPB5A8MRT5 1133 aa14.67□□□□□ -0.06
HOXA9-201ENST00000343483 CNN1P51911 297 aaKnown RBP14.67□□□□□ -0.06
HOXA9-201ENST00000343483 IGHV7-81A0A0B4J1V7 117 aa14.67□□□□□ -0.06
HOXA9-201ENST00000343483 PSG1P11464 419 aa14.67□□□□□ -0.06
HOXA9-201ENST00000343483 S4R3C0 116 aa14.67□□□□□ -0.06
HOXA9-201ENST00000343483 TRAV9-1A0A075B6T8 112 aa14.66□□□□□ -0.06
HOXA9-201ENST00000343483 AMBPP02760 352 aa14.66□□□□□ -0.06
HOXA9-201ENST00000343483 SNRPCP09234 159 aaKnown RBP14.66□□□□□ -0.06
HOXA9-201ENST00000343483 KRTAP10-9P60411 292 aa14.66□□□□□ -0.06
HOXA9-201ENST00000343483 LYZP61626 148 aa14.66□□□□□ -0.06
HOXA9-201ENST00000343483 CTAG1AP78358 180 aa14.66□□□□□ -0.06
HOXA9-201ENST00000343483 RPEL1Q2QD12 228 aa14.66□□□□□ -0.06
HOXA9-201ENST00000343483 V9GYV3 84 aa14.66□□□□□ -0.06
HOXA9-201ENST00000343483 TRAV40A0A0B4J280 105 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 BRD3OSQ6XYD6 125 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 IGHV1-69DA0A0B4J2H0 117 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 IGKV1-17P01599 117 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 IGHV1-69P01742 117 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 TTC9CQ8N5M4 171 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 FXYD5Q96DB9 178 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 IGF2BP2-AS1Q96M15 143 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 FANCD2OSQ96PS1 177 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 HSPB9Q9BQS6 159 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 ABCA2Q9BZC7 2435 aa14.65□□□□□ -0.06
HOXA9-201ENST00000343483 IGLV11-55A0A075B6I3 123 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 GCGP01275 180 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 HLA-DRB1P01911 266 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 RD3LP0DJH9 198 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 LEMD1Q68G75 181 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 RNASE7Q9H1E1 156 aaKnown RBP14.64□□□□□ -0.07
HOXA9-201ENST00000343483 MGST1P10620 155 aaKnown RBP14.64□□□□□ -0.07
HOXA9-201ENST00000343483 EGR2P11161 476 aaPredicted RBP14.64□□□□□ -0.07
HOXA9-201ENST00000343483 PLP1P60201 277 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 YPEL3P61236 119 aaPredicted RBP14.64□□□□□ -0.07
HOXA9-201ENST00000343483 ZNF329Q86UD4 541 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 STXBP6Q8NFX7 210 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 HIGD1AQ9Y241 93 aa14.64□□□□□ -0.07
HOXA9-201ENST00000343483 IGLV2-8P01709 118 aa14.63□□□□□ -0.07
HOXA9-201ENST00000343483 MSMBP08118 114 aa14.63□□□□□ -0.07
HOXA9-201ENST00000343483 OSTCQ9NRP0 149 aa14.63□□□□□ -0.07
HOXA9-201ENST00000343483 ZMAT5Q9UDW3 170 aaKnown RBP14.63□□□□□ -0.07
HOXA9-201ENST00000343483 TEX15Q9BXT5 2789 aa14.63□□□□□ -0.07
HOXA9-201ENST00000343483 PDZD2O15018 2839 aa14.63□□□□□ -0.07
HOXA9-201ENST00000343483 ADMP35318 185 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 TAS2R60P59551 318 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 BLNKQ8WV28 456 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 CDC42EP3Q9UKI2 254 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 ABCA1O95477 2261 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 GNG7O60262 68 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 CBLN1P23435 193 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 DSCR9P59020 149 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 OR8I2Q8N0Y5 310 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 LINC00479Q96M42 142 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 TMUB1Q9BVT8 246 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 C7orf69Q9H7B7 122 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 THYN1Q9P016 225 aa14.62□□□□□ -0.07
HOXA9-201ENST00000343483 MAP1AP78559 2803 aaPredicted RBP14.61□□□□□ -0.07
HOXA9-201ENST00000343483 SH2D7A6NKC9 451 aaPredicted RBP14.61□□□□□ -0.07
HOXA9-201ENST00000343483 PEX7O00628 323 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 ISLRO14498 428 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 IGHV4-38-2P0DP08 117 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 HIST1H1BP16401 226 aaKnown RBP14.61□□□□□ -0.07
HOXA9-201ENST00000343483 ECSCRQ19T08 205 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 DNLZQ5SXM8 178 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 TMEM219Q86XT9 240 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 NAV2Q8IVL1 2488 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 OR2J3O76001 311 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 RANP62826 216 aaKnown RBP14.61□□□□□ -0.07
HOXA9-201ENST00000343483 IBA57Q5T440 356 aaKnown RBP14.61□□□□□ -0.07
HOXA9-201ENST00000343483 NHLRC2Q8NBF2 726 aa14.61□□□□□ -0.07
HOXA9-201ENST00000343483 ATP6V0E1O15342 81 aa14.6□□□□□ -0.07
HOXA9-201ENST00000343483 NDUFB8O95169 186 aa14.6□□□□□ -0.07
HOXA9-201ENST00000343483 IGHV3-23P01764 117 aa14.6□□□□□ -0.07
HOXA9-201ENST00000343483 MFAP4P55083 255 aa14.6□□□□□ -0.07
HOXA9-201ENST00000343483 Q56UQ5 140 aa14.6□□□□□ -0.07
HOXA9-201ENST00000343483 UNQ5815/PRO19632Q6UWF5 114 aa14.6□□□□□ -0.07
HOXA9-201ENST00000343483 SLC25A39Q9BZJ4 359 aaPredicted RBP14.6□□□□□ -0.07
HOXA9-201ENST00000343483 GP9P14770 177 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 IER3P46695 156 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 TMEM18Q96B42 140 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 MRPL18Q9H0U6 180 aaKnown RBP14.59□□□□□ -0.07
HOXA9-201ENST00000343483 SERTAD4Q9NUC0 356 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 HIF1ANQ9NWT6 349 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 C21orf62Q9NYP8 219 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 TRAV34A0A0B4J273 112 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 B4DSR2 109 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 TOMM40O96008 361 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 PAX1P15863 534 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 MYCNOSP40205 109 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 JOSD1Q15040 202 aaPredicted RBP14.59□□□□□ -0.07
HOXA9-201ENST00000343483 GBGT1Q8N5D6 347 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 PRDM13Q9H4Q3 707 aa14.59□□□□□ -0.07
HOXA9-201ENST00000343483 CELSR1Q9NYQ6 3014 aa14.58□□□□□ -0.07
HOXA9-201ENST00000343483 TRAV30A0A087WSZ9 112 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms