RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 IFI27L1Q96BM0 104 aa14.92□□□□□ -0.02
SMPD1-201ENST00000342245 SS18L2Q9UHA2 77 aa14.92□□□□□ -0.02
SMPD1-201ENST00000342245 PRO0461Q9UI25 63 aa14.92□□□□□ -0.02
SMPD1-201ENST00000342245 RNF183Q96D59 192 aa14.92□□□□□ -0.02
SMPD1-201ENST00000342245 NHP2Q9NX24 153 aaKnown RBP14.92□□□□□ -0.02
SMPD1-201ENST00000342245 KLK10O43240 276 aa14.91□□□□□ -0.02
SMPD1-201ENST00000342245 NXPH1P58417 271 aa14.91□□□□□ -0.02
SMPD1-201ENST00000342245 TBC1D28Q2M2D7 210 aa14.91□□□□□ -0.02
SMPD1-201ENST00000342245 CDIP1Q9H305 208 aa14.91□□□□□ -0.02
SMPD1-201ENST00000342245 H3BMG7 143 aa14.91□□□□□ -0.02
SMPD1-201ENST00000342245 APOMO95445 188 aa14.91□□□□□ -0.02
SMPD1-201ENST00000342245 ZNF576Q9H609 170 aa14.91□□□□□ -0.02
SMPD1-201ENST00000342245 SDK1Q7Z5N4 2213 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 IQCF6A8MYZ5 107 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 RNASE2P10153 161 aaKnown RBP14.9□□□□□ -0.02
SMPD1-201ENST00000342245 IFI27P40305 119 aaPredicted RBP14.9□□□□□ -0.02
SMPD1-201ENST00000342245 LINC01559Q495D7 138 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 TM4SF20Q53R12 229 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 UPK2O00526 184 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 COX6A1P12074 109 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 FOXI1Q12951 378 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 ZNF493Q6ZR52 646 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 C1QTNF4Q9BXJ3 329 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 RAB9BQ9NP90 201 aa14.9□□□□□ -0.02
SMPD1-201ENST00000342245 IGFBP4P22692 258 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 SHISA2Q6UWI4 295 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 U3KQK5 164 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 TRBV6-1A0A0K0K1D8 114 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 K7ERJ3 54 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 FSTL3O95633 263 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 TCRAP04437 139 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 FOXG1P55316 489 aaPredicted RBP14.89□□□□□ -0.03
SMPD1-201ENST00000342245 TUSC5Q8IXB3 177 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 C20orf78Q9BR46 151 aa14.89□□□□□ -0.03
SMPD1-201ENST00000342245 A0A1B0GWB2 263 aa14.88□□□□□ -0.03
SMPD1-201ENST00000342245 WNT9BO14905 357 aa14.88□□□□□ -0.03
SMPD1-201ENST00000342245 PATE2Q6UY27 113 aa14.88□□□□□ -0.03
SMPD1-201ENST00000342245 SYT8Q8NBV8 401 aa14.88□□□□□ -0.03
SMPD1-201ENST00000342245 INSL3P51460 131 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 Q6ZUT4 128 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 PPP1R35Q8TAP8 253 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 RFPL3SP0C7P2 107 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 GATA3P23771 443 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 ABHD17BQ5VST6 288 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 LINC00305Q7Z4B0 112 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 SLC25A45Q8N413 288 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 RBMXL3Q8N7X1 1067 aaKnown RBP14.87□□□□□ -0.03
SMPD1-201ENST00000342245 RND1Q92730 232 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 ANAPC13Q9BS18 74 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 CXXC4Q9H2H0 198 aa14.87□□□□□ -0.03
SMPD1-201ENST00000342245 TRBV7-9A0A0J9YWB2 115 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 INS-IGF2F8WCM5 200 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 LOXL3P58215 753 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 ERHP84090 104 aaKnown RBP14.86□□□□□ -0.03
SMPD1-201ENST00000342245 Q86TA4 180 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 RITA1Q96K30 269 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 ZMAT4Q9H898 229 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 TRBV25-1A0A075B6N4 114 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 OVOL3O00110 214 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 RRN3P1Q2M238 152 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 C12orf74Q32Q52 190 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 C1orf122Q6ZSJ8 110 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 C11orf53Q8IXP5 236 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 THAP8Q8NA92 274 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 SGK494Q96LW2 274 aa14.86□□□□□ -0.03
SMPD1-201ENST00000342245 TNFRSF13BO14836 293 aaPredicted RBP14.85□□□□□ -0.03
SMPD1-201ENST00000342245 ARMS2P0C7Q2 107 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 ORMDL3Q8N138 153 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 OBP2BQ9NPH6 170 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 NPIPB5A8MRT5 1133 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 NDUFS7O75251 213 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 MT-ATP8P03928 68 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 EVI2AP22794 236 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 ZNF134P52741 427 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 PAX8Q06710 450 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 PRELID3AQ96N28 172 aa14.85□□□□□ -0.03
SMPD1-201ENST00000342245 THBDP07204 575 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 FAM106CPP0CH98 169 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 MLANAQ16655 118 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 FAM106AQ4KMX7 169 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 MDP1Q86V88 176 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 RALYQ9UKM9 306 aaKnown RBP14.84□□□□□ -0.03
SMPD1-201ENST00000342245 CABIN1Q9Y6J0 2220 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 MYOD1P15172 320 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 LOXL1Q08397 574 aaPredicted RBP14.84□□□□□ -0.03
SMPD1-201ENST00000342245 EDDM3AQ14507 147 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 DCTN5Q9BTE1 182 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 B4GALT7Q9UBV7 327 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 METRNQ9UJH8 293 aa14.84□□□□□ -0.03
SMPD1-201ENST00000342245 SUB1P53999 127 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMPD1-201ENST00000342245 TCTAP57738 103 aa14.83□□□□□ -0.04
SMPD1-201ENST00000342245 SPANXA1Q9NS26 97 aa14.83□□□□□ -0.04
SMPD1-201ENST00000342245 KLF17Q5JT82 389 aaPredicted RBP14.83□□□□□ -0.04
SMPD1-201ENST00000342245 SRSF12Q8WXF0 261 aaKnown RBP14.83□□□□□ -0.04
SMPD1-201ENST00000342245 LOC389332A0A1B0GUA5 103 aa14.82□□□□□ -0.04
SMPD1-201ENST00000342245 D6R8Y8 96 aa14.82□□□□□ -0.04
SMPD1-201ENST00000342245 ZNF826PQ6ZT77 177 aa14.82□□□□□ -0.04
SMPD1-201ENST00000342245 Q9H3A6 140 aa14.82□□□□□ -0.04
SMPD1-201ENST00000342245 OTORQ9NRC9 128 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms