RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 SCGB1D4Q6XE38 83 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
CDH5-201ENST00000341529 A6NNC1 897 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 APOHP02749 345 aaPredicted RBP9.74□□□□□ -0.85
CDH5-201ENST00000341529 ARL6IP6Q8N6S5 226 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 NUDT10Q8NFP7 164 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 ZNF502Q8TBZ5 544 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
CDH5-201ENST00000341529 ARPC1AQ92747 370 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 NUDT11Q96G61 164 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 UQCR10Q9UDW1 63 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 NBR2O15453 112 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 TRGV3P03979 118 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 C11orf53Q8IXP5 236 aa9.74□□□□□ -0.85
CDH5-201ENST00000341529 RNASE2P10153 161 aaKnown RBP9.73□□□□□ -0.85
CDH5-201ENST00000341529 RNF125Q96EQ8 232 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 RPP21Q9H633 154 aaKnown RBP9.73□□□□□ -0.85
CDH5-201ENST00000341529 IGHV3OR16-12A0A075B7B8 117 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 NPIPB5A8MRT5 1133 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 LMO1P25800 156 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 HIST1H1AQ02539 215 aaPredicted RBP9.73□□□□□ -0.85
CDH5-201ENST00000341529 PRSS8Q16651 343 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 Q8TAT8 98 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 A0A1B0GUT8 65 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 A0A1W2PRE2 83 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 C7orf71A4D174 169 aa9.73□□□□□ -0.85
CDH5-201ENST00000341529 A0A1W2PPI3 338 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 NPPCP23582 126 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 Q1RN00 199 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 C17orf58Q2M2W7 97 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 BRD3OSQ6XYD6 125 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 SLC25A48Q6ZT89 311 aaKnown RBP9.72□□□□□ -0.85
CDH5-201ENST00000341529 COL6A3P12111 3177 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 CRIP3Q6Q6R5 217 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 PKD1L2Q7Z442 2459 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 IGHV1-3A0A0C4DH29 117 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 A0A1B0GW64 132 aa9.72□□□□□ -0.85
CDH5-201ENST00000341529 PFN1P07737 140 aaKnown RBP9.72□□□□□ -0.85
CDH5-201ENST00000341529 GRNP28799 593 aaKnown RBP9.72□□□□□ -0.85
CDH5-201ENST00000341529 IGKV2-40A0A087WW87 121 aaPredicted RBP9.71□□□□□ -0.85
CDH5-201ENST00000341529 C15orf65H3BRN8 121 aa9.71□□□□□ -0.85
CDH5-201ENST00000341529 IGKV2D-40P01614 121 aaPredicted RBP9.71□□□□□ -0.85
CDH5-201ENST00000341529 GCSHP23434 173 aa9.71□□□□□ -0.85
CDH5-201ENST00000341529 TMEM70Q9BUB7 260 aa9.71□□□□□ -0.85
CDH5-201ENST00000341529 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.85
CDH5-201ENST00000341529 NUDT3O95989 172 aa9.71□□□□□ -0.85
CDH5-201ENST00000341529 IZUMO1RA6ND01 250 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 SCGB1C2P0DMR2 95 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 BMI1P35226 326 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 ZNF664Q8N3J9 261 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 LSM4Q9Y4Z0 139 aaKnown RBP9.71□□□□□ -0.86
CDH5-201ENST00000341529 C9JCJ5 164 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 M0QZK8 103 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 TAS2R60P59551 318 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 MSMPQ1L6U9 139 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 TMEM30BQ3MIR4 351 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 VKORC1Q9BQB6 163 aa9.71□□□□□ -0.86
CDH5-201ENST00000341529 CHD3Q12873 2000 aaKnown RBP9.71□□□□□ -0.86
CDH5-201ENST00000341529 GPX1P07203 203 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 RHOGP84095 191 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 FBLN7Q53RD9 439 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 UTF1Q5T230 341 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 DUX5Q96PT3 197 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 NDUFAF3Q9BU61 184 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 OSTCQ9NRP0 149 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 NCR2O95944 276 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 ATP5IP56385 69 aaPredicted RBP9.7□□□□□ -0.86
CDH5-201ENST00000341529 MYOZ3Q8TDC0 251 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 PRELID3AQ96N28 172 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 C7orf69Q9H7B7 122 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 CDC42EP3Q9UKI2 254 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 NDUFS7O75251 213 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 ZNF324O75467 553 aaPredicted RBP9.7□□□□□ -0.86
CDH5-201ENST00000341529 VDAC2P45880 294 aaPredicted RBP9.7□□□□□ -0.86
CDH5-201ENST00000341529 NDPQ00604 133 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDH5-201ENST00000341529 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 OR10AG1Q8NH19 301 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 DKK4Q9UBT3 224 aa9.7□□□□□ -0.86
CDH5-201ENST00000341529 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 ATP5G2Q06055 141 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 WT1-ASQ06250 92 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 C11orf44Q8N8P7 122 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 PRDM13Q9H4Q3 707 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 PSG8Q9UQ74 426 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 ZNF257Q9Y2Q1 563 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 SIGLEC9Q9Y336 463 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 EVI2AP22794 236 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 RBPMS2Q6ZRY4 209 aaKnown RBP9.69□□□□□ -0.86
CDH5-201ENST00000341529 OR10J6PQ8NGY7 276 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 TMEM167AQ8TBQ9 72 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 FN1P02751 2386 aaKnown RBP9.69□□□□□ -0.86
CDH5-201ENST00000341529 TRBV9A0A0B4J1U6 114 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 HAX1O00165 279 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 DLX6P56179 175 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 FAM71F2Q6NXP2 309 aa9.69□□□□□ -0.86
CDH5-201ENST00000341529 TRAV30A0A087WSZ9 112 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms