RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 DCHS2Q6V1P9 2916 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 PGPA6NDG6 321 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 GATCO43716 136 aaKnown RBP11.88□□□□□ -0.51
TPM3-208ENST00000341485 SERF1AO75920 110 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 NBEAP1P0C6P0 100 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 ESDP10768 282 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 RAB4BP61018 213 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 MMDQ15546 238 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 TMEM183BQ1AE95 376 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 MRPL54Q6P161 138 aaKnown RBP11.88□□□□□ -0.51
TPM3-208ENST00000341485 CFHR4Q92496 578 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 WNT10AQ9GZT5 417 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 C7orf69Q9H7B7 122 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 HILPDAQ9Y5L2 63 aa11.88□□□□□ -0.51
TPM3-208ENST00000341485 UBR5O95071 2799 aaPredicted RBP11.87□□□□□ -0.51
TPM3-208ENST00000341485 IZUMO1RA6ND01 250 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 ODF3BA8MYP8 253 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 MT-ND6P03923 174 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 AMY1AP04745 511 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 HOXB4P17483 251 aaPredicted RBP11.87□□□□□ -0.51
TPM3-208ENST00000341485 RPL19P84098 196 aaKnown RBP11.87□□□□□ -0.51
TPM3-208ENST00000341485 Q0VG73 95 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 FLNCQ14315 2725 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 PSG1P11464 419 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 COX19Q49B96 90 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 FBLN7Q53RD9 439 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 SRSF8Q9BRL6 282 aaKnown RBP11.87□□□□□ -0.51
TPM3-208ENST00000341485 HIGD1AQ9Y241 93 aa11.87□□□□□ -0.51
TPM3-208ENST00000341485 H3BTX0 84 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 CNIH1O95406 144 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 LYZP61626 148 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 KIAA1644Q3SXP7 199 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 REC114Q7Z4M0 266 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 GNB4Q9HAV0 340 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 RPH3ALQ9UNE2 315 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 KLF12Q9Y4X4 402 aa11.86□□□□□ -0.51
TPM3-208ENST00000341485 NBR2O15453 112 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 CD24P25063 80 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 TPPP2P59282 170 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 UBE2G1P62253 170 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 PRR27Q6MZM9 219 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 POLR3KQ9Y2Y1 108 aaPredicted RBP11.85□□□□□ -0.51
TPM3-208ENST00000341485 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 KMT2BQ9UMN6 2715 aaPredicted RBP11.85□□□□□ -0.51
TPM3-208ENST00000341485 K7EIM0 57 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 SCGB1D1O95968 90 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 IGKV1-17P01599 117 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 KRTAP10-9P60411 292 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 PAFAH1B2P68402 229 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 ZNF600Q6ZNG1 722 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 Q6ZWC4 215 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 NPBQ8NG41 125 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 Q9H3A6 140 aa11.85□□□□□ -0.51
TPM3-208ENST00000341485 A8MWP6 167 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 NDUFA3O95167 84 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 HLA-DQA1P01909 254 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 SLC25A16P16260 332 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 LURAP1LQ8IV03 231 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 NOL4LQ96MY1 436 aaPredicted RBP11.84□□□□□ -0.51
TPM3-208ENST00000341485 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 RASL11BQ9BPW5 248 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 ATG101Q9BSB4 218 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 SLC25A39Q9BZJ4 359 aaPredicted RBP11.84□□□□□ -0.51
TPM3-208ENST00000341485 NAGKQ9UJ70 344 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 ABCA1O95477 2261 aa11.84□□□□□ -0.51
TPM3-208ENST00000341485 BMPR1BO00238 502 aa11.83□□□□□ -0.51
TPM3-208ENST00000341485 MINOS1Q5TGZ0 78 aa11.83□□□□□ -0.51
TPM3-208ENST00000341485 FAM103A1Q9BTL3 118 aaKnown RBP11.83□□□□□ -0.51
TPM3-208ENST00000341485 MINOS1-NBL1R4GNA1 71 aa11.83□□□□□ -0.51
TPM3-208ENST00000341485 CD33P20138 364 aa11.83□□□□□ -0.52
TPM3-208ENST00000341485 USF2Q15853 346 aaPredicted RBP11.83□□□□□ -0.52
TPM3-208ENST00000341485 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
TPM3-208ENST00000341485 NUP35Q8NFH5 326 aa11.83□□□□□ -0.52
TPM3-208ENST00000341485 GPR82Q96P67 336 aa11.83□□□□□ -0.52
TPM3-208ENST00000341485 MLST8Q9BVC4 326 aa11.83□□□□□ -0.52
TPM3-208ENST00000341485 MRPL27Q9P0M9 148 aaKnown RBP11.83□□□□□ -0.52
TPM3-208ENST00000341485 FAM208BQ5VWN6 2430 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 TOMM40O96008 361 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 TCRAP04437 139 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 UBE2E1P51965 193 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 WIPF2Q8TF74 440 aaPredicted RBP11.82□□□□□ -0.52
TPM3-208ENST00000341485 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 ZNF331Q9NQX6 463 aaPredicted RBP11.82□□□□□ -0.52
TPM3-208ENST00000341485 BEX4Q9NWD9 120 aaPredicted RBP11.82□□□□□ -0.52
TPM3-208ENST00000341485 ZNF586Q9NXT0 402 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 TMEM14CQ9P0S9 112 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
TPM3-208ENST00000341485 OOSP1A8MZH6 123 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 APCSP02743 223 aa11.82□□□□□ -0.52
TPM3-208ENST00000341485 HIST1H1EP10412 219 aaKnown RBP11.82□□□□□ -0.52
TPM3-208ENST00000341485 SRIP30626 198 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms