RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 COL7A1Q02388 2944 aa9.9□□□□□ -0.83
TUBD1-202ENST00000340993 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
TUBD1-202ENST00000340993 BMI1P35226 326 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 EIF2B2P49770 351 aaKnown RBP9.89□□□□□ -0.83
TUBD1-202ENST00000340993 RAP2BP61225 183 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 NBEAL2Q6ZNJ1 2754 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 FAM24BQ8N5W8 94 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 OR2K2Q8NGT1 345 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 GGACTQ9BVM4 153 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 GGTLC1Q9BX51 225 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 MS4A6AQ9H2W1 248 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 WFDC1Q9HC57 220 aa9.89□□□□□ -0.83
TUBD1-202ENST00000340993 LSM4Q9Y4Z0 139 aaKnown RBP9.89□□□□□ -0.83
TUBD1-202ENST00000340993 A0A1W2PS18 150 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 APRG1Q8IVJ8 170 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 Q8N1Y9 231 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 GRAMD2BQ96HH9 432 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 TMEM231Q9H6L2 316 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 SLC45A2Q9UMX9 530 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 WDR83OSQ9Y284 106 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 SMAD5-AS1Q9Y6J3 95 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 A0A1B0GVG6 124 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 OR11H12B2RN74 326 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 TSPAN4O14817 238 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 HYPMO75409 117 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 IGHV4-30-4P0DP06 118 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 FGL1Q08830 312 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 RAB31Q13636 194 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 C16orf54Q6UWD8 224 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 ZNF546Q86UE3 836 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 OR8I2Q8N0Y5 310 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 GLMPQ8WWB7 406 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 ATP5SQ99766 215 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 RSG1Q9BU20 258 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 TUBA4BQ9H853 241 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 FBXL17Q9UF56 701 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 HIGD1AQ9Y241 93 aa9.88□□□□□ -0.83
TUBD1-202ENST00000340993 DNAH9Q9NYC9 4486 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 FNDC10F2Z333 226 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 G3V3Q6 166 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 ARPC5O15511 151 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 BUB3O43684 328 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 COX7A2P2O60397 106 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 NUP62P37198 522 aaPredicted RBP9.87□□□□□ -0.83
TUBD1-202ENST00000340993 B2MP61769 119 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 VWC2Q2TAL6 325 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 FAM90A2PQ658T7 463 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 SIGLEC15Q6ZMC9 328 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 SPAG8Q99932 426 aaPredicted RBP9.87□□□□□ -0.83
TUBD1-202ENST00000340993 NPCDR1Q9BY65 106 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 ARV1Q9H2C2 271 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 SRD5A3Q9H8P0 318 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 U3KQE9 123 aa9.87□□□□□ -0.83
TUBD1-202ENST00000340993 EIF3GO75821 320 aaKnown RBP eCLIP9.86□□□□□ -0.83
TUBD1-202ENST00000340993 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 LYL1P12980 280 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 ATP6V1FQ16864 119 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 MORN5Q5VZ52 161 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 PATE2Q6UY27 113 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 Q6ZNX1 250 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 SLC25A39Q9BZJ4 359 aaPredicted RBP9.86□□□□□ -0.83
TUBD1-202ENST00000340993 SLC25A32Q9H2D1 315 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 TRAV25A0A0B4J276 109 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 OR4C46A6NHA9 309 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 ZNF98A6NK75 572 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 H3BTX0 84 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 FRMD6-AS1P0C7T7 363 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 SELENOTP62341 195 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 PAFAH1B2P68402 229 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 ODF3L2Q3SX64 289 aa9.86□□□□□ -0.83
TUBD1-202ENST00000340993 INO80EQ8NBZ0 244 aaPredicted RBP9.86□□□□□ -0.83
TUBD1-202ENST00000340993 WDR61Q9GZS3 305 aaKnown RBP9.86□□□□□ -0.83
TUBD1-202ENST00000340993 TRAV5A0A0B4J249 113 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 IFNA5P01569 189 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 DEFB1P60022 68 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 OPCMLQ14982 345 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 C10orf113Q5VZT2 155 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 LINC00305Q7Z4B0 112 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 HSD17B11Q8NBQ5 300 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 SCGB1C1Q8TD33 95 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 TMEM37Q8WXS4 190 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 SLC39A9Q9NUM3 307 aa9.85□□□□□ -0.83
TUBD1-202ENST00000340993 H3BRN7 92 aa9.84□□□□□ -0.83
TUBD1-202ENST00000340993 RPL35AP18077 110 aaKnown RBP9.84□□□□□ -0.83
TUBD1-202ENST00000340993 DEFB131AP59861 70 aa9.84□□□□□ -0.83
TUBD1-202ENST00000340993 IGFL4Q6B9Z1 124 aa9.84□□□□□ -0.83
TUBD1-202ENST00000340993 Q6ZRG5 221 aa9.84□□□□□ -0.83
TUBD1-202ENST00000340993 ZNF709Q8N972 641 aa9.84□□□□□ -0.83
TUBD1-202ENST00000340993 CITED4Q96RK1 184 aa9.84□□□□□ -0.83
TUBD1-202ENST00000340993 RNF222A6NCQ9 220 aa9.83□□□□□ -0.84
TUBD1-202ENST00000340993 HELTA6NFD8 242 aa9.83□□□□□ -0.84
TUBD1-202ENST00000340993 CFDP00746 253 aaPredicted RBP9.83□□□□□ -0.84
TUBD1-202ENST00000340993 CD300CQ08708 224 aa9.83□□□□□ -0.84
TUBD1-202ENST00000340993 PSMG4Q5JS54 123 aa9.83□□□□□ -0.84
TUBD1-202ENST00000340993 SPATA31B1PQ5VZV4 182 aa9.83□□□□□ -0.84
TUBD1-202ENST00000340993 OR11H4Q8NGC9 324 aa9.83□□□□□ -0.84
TUBD1-202ENST00000340993 LINC00052Q96N35 136 aa9.83□□□□□ -0.84
TUBD1-202ENST00000340993 SHANK2-AS3Q9BTD1 123 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms