RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 WT1P19544 449 aaPredicted RBP11.44□□□□□ -0.58
PCDH8-201ENST00000338862 AP5S1Q9NUS5 200 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 OTOGLQ3ZCN5 2332 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 GAGE10A6NGK3 116 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 F2RL2O00254 374 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 TMEM108Q6UXF1 575 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 RITA1Q96K30 269 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 DSCAML1Q8TD84 2053 aa11.44□□□□□ -0.58
PCDH8-201ENST00000338862 COL4A2P08572 1712 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 KLK10O43240 276 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 GAFA1Q96PS6 74 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 SLC25A15Q9Y619 301 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 ANKRD11Q6UB99 2663 aaPredicted RBP11.43□□□□□ -0.58
PCDH8-201ENST00000338862 PPIFP30405 207 aaKnown RBP11.43□□□□□ -0.58
PCDH8-201ENST00000338862 C5orf17Q8NAS9 161 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 MRPL32Q9BYC8 188 aaKnown RBP11.43□□□□□ -0.58
PCDH8-201ENST00000338862 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
PCDH8-201ENST00000338862 SMIM27A0A1W2PRY6 76 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 K7EQM0 130 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 HLA-DRB1P01911 266 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 PAX1P15863 534 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 AARDQ4LEZ3 155 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 OR4F17Q8NGA8 305 aa11.43□□□□□ -0.58
PCDH8-201ENST00000338862 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 SYS1-DBNDD2H3BUS1 97 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 PATE2Q6UY27 113 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 THYN1Q9P016 225 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 SMKR1H3BMG3 65 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 OR2J3O76001 311 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 IGLV2-8P01709 118 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
PCDH8-201ENST00000338862 IGHV3-49A0A0A0MS15 119 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 A0A1W2PPI3 338 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 ORM1P02763 201 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 PRSS1P07477 247 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 TMEM200BQ69YZ2 307 aa11.42□□□□□ -0.58
PCDH8-201ENST00000338862 OSR1Q8TAX0 266 aaPredicted RBP11.42□□□□□ -0.58
PCDH8-201ENST00000338862 H3BUT2 72 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 NCR2O95944 276 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 IL4P05112 153 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 CD40P25942 277 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 CSN1S1P47710 185 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 LAMA5O15230 3695 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 IGHV3-66A0A0C4DH42 116 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 ARMS2P0C7Q2 107 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 MBNL2Q5VZF2 373 aaKnown RBP11.41□□□□□ -0.58
PCDH8-201ENST00000338862 C22orf34Q6ZV56 151 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 DEFB104AQ8WTQ1 72 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 C17orf77Q96MU5 243 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
PCDH8-201ENST00000338862 IGHV1-24A0A0C4DH33 117 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 H0YJW9 148 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 CDX4O14627 284 aaPredicted RBP11.4□□□□□ -0.58
PCDH8-201ENST00000338862 SP9P0CG40 484 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 TMPRSS3P57727 454 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 GAGE1Q13065 139 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 RBPMS2Q6ZRY4 209 aaKnown RBP11.4□□□□□ -0.58
PCDH8-201ENST00000338862 LY96Q9Y6Y9 160 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 DDB2Q92466 427 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 C19orf24Q9BVV8 132 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 HIF1ANQ9NWT6 349 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 Q71RC1 249 aaPredicted RBP11.4□□□□□ -0.58
PCDH8-201ENST00000338862 CACNG8Q8WXS5 425 aa11.4□□□□□ -0.58
PCDH8-201ENST00000338862 GNG7O60262 68 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 LY6HO94772 140 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 GCSHP23434 173 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 TWIST1Q15672 202 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
PCDH8-201ENST00000338862 SPATA12Q7Z6I5 190 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 IGF2RP11717 2491 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 PRRG2O14669 202 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 LIPFP07098 398 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 CFHR2P36980 270 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 RELQ04864 619 aaPredicted RBP11.39□□□□□ -0.59
PCDH8-201ENST00000338862 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 FAM162BQ5T6X4 162 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 STXBP6Q8NFX7 210 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 PLSCR4Q9NRQ2 329 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 TCRAP04437 139 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 CACNG7P62955 275 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 RIGQ13278 110 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 ORAOV1Q8WV07 137 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 DOPEY2Q9Y3R5 2298 aa11.39□□□□□ -0.59
PCDH8-201ENST00000338862 IGKV3-7A0A075B6H7 116 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 A0A1B0GUT8 65 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 C7orf71A4D174 169 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 GPR183P32249 361 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 BSPH1Q075Z2 132 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 Q8N976 141 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 IGHV1-69-2A0A0G2JMI3 117 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 AAMDCQ9H7C9 122 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 CKS2P33552 79 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms