RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 ZNF672Q499Z4 452 aaPredicted RBP18.6■□□□□ 0.57
NDEL1-201ENST00000334527 LINC00322Q6ZN03 302 aaPredicted RBP18.6■□□□□ 0.57
NDEL1-201ENST00000334527 SSBP4Q9BWG4 385 aaPredicted RBP18.6■□□□□ 0.57
NDEL1-201ENST00000334527 RPP21Q9H633 154 aaKnown RBP18.6■□□□□ 0.57
NDEL1-201ENST00000334527 VWC2LB2RUY7 222 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 LY6LH3BQJ8 138 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 I3L2K1 104 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 LTAP01374 205 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 NIT1Q86X76 327 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 OR8B3Q8NGG8 313 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 OR8B2Q96RD0 313 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 MRPL27Q9P0M9 148 aaKnown RBP18.59■□□□□ 0.57
NDEL1-201ENST00000334527 NTF3P20783 257 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 TCF24Q7RTU0 167 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 RASL11BQ9BPW5 248 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 WNT10AQ9GZT5 417 aa18.59■□□□□ 0.57
NDEL1-201ENST00000334527 TACC2O95359 2948 aa18.58■□□□□ 0.57
NDEL1-201ENST00000334527 TIMM23O14925 209 aa18.58■□□□□ 0.56
NDEL1-201ENST00000334527 GPR6P46095 362 aaPredicted RBP18.58■□□□□ 0.56
NDEL1-201ENST00000334527 ATP5L2Q7Z4Y8 100 aa18.58■□□□□ 0.56
NDEL1-201ENST00000334527 CNIH1O95406 144 aa18.57■□□□□ 0.56
NDEL1-201ENST00000334527 RNF5Q99942 180 aa18.57■□□□□ 0.56
NDEL1-201ENST00000334527 SLC25A39Q9BZJ4 359 aaPredicted RBP18.57■□□□□ 0.56
NDEL1-201ENST00000334527 TLN1Q9Y490 2541 aaKnown RBP18.57■□□□□ 0.56
NDEL1-201ENST00000334527 CEP295Q9C0D2 2601 aa18.57■□□□□ 0.56
NDEL1-201ENST00000334527 LDLRAD2Q5SZI1 272 aa18.57■□□□□ 0.56
NDEL1-201ENST00000334527 OR4B1Q8NGF8 309 aa18.57■□□□□ 0.56
NDEL1-201ENST00000334527 LRBAP50851 2863 aa18.57■□□□□ 0.56
NDEL1-201ENST00000334527 A0A1B0GXF2 115 aa18.56■□□□□ 0.56
NDEL1-201ENST00000334527 LIPFP07098 398 aa18.56■□□□□ 0.56
NDEL1-201ENST00000334527 C3orf79P0CE67 100 aa18.56■□□□□ 0.56
NDEL1-201ENST00000334527 PRSS22Q9GZN4 317 aa18.56■□□□□ 0.56
NDEL1-201ENST00000334527 PTPRZ1P23471 2315 aaPredicted RBP18.56■□□□□ 0.56
NDEL1-201ENST00000334527 OR2J3O76001 311 aa18.56■□□□□ 0.56
NDEL1-201ENST00000334527 P01737 135 aa18.56■□□□□ 0.56
NDEL1-201ENST00000334527 MMDQ15546 238 aa18.56■□□□□ 0.56
NDEL1-201ENST00000334527 ALKBH7Q9BT30 221 aaPredicted RBP18.56■□□□□ 0.56
NDEL1-201ENST00000334527 C19orf71A6NCJ1 209 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 LY6HO94772 140 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 OTORQ9NRC9 128 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 ZNF492Q9P255 531 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 A8MWL6 223 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 TCAPO15273 167 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 KLF5Q13887 457 aaPredicted RBP18.55■□□□□ 0.56
NDEL1-201ENST00000334527 OR2D3Q8NGH3 330 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 BORCS7Q96B45 105 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 TMEM14CQ9P0S9 112 aa18.55■□□□□ 0.56
NDEL1-201ENST00000334527 IGKV1-17P01599 117 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 PRR31Q5SQ13 230 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 LY6G5BQ8NDX9 201 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 DAZAP1Q96EP5 407 aaKnown RBP18.54■□□□□ 0.56
NDEL1-201ENST00000334527 HBBP68871 147 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 FBXL19-AS1Q494R0 122 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 EXOC3-AS1Q8N2X6 119 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 GTSF1Q8WW33 167 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 SRSF8Q9BRL6 282 aaKnown RBP18.54■□□□□ 0.56
NDEL1-201ENST00000334527 HILPDAQ9Y5L2 63 aa18.54■□□□□ 0.56
NDEL1-201ENST00000334527 DCHS2Q6V1P9 2916 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 TRAV8-1A0A0A6YYK1 113 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 A6NNC1 897 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 TOX4O94842 621 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 HTR1DP28221 377 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 CT83Q5H943 113 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 Q86TA4 180 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 HSBP1O75506 76 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 ARF6P62330 175 aa18.53■□□□□ 0.56
NDEL1-201ENST00000334527 ABCA1O95477 2261 aa18.52■□□□□ 0.56
NDEL1-201ENST00000334527 K7EIM0 57 aa18.52■□□□□ 0.56
NDEL1-201ENST00000334527 CCL21O00585 134 aa18.52■□□□□ 0.56
NDEL1-201ENST00000334527 IGFBPL1Q8WX77 278 aa18.52■□□□□ 0.56
NDEL1-201ENST00000334527 PGLYRP4Q96LB8 373 aa18.52■□□□□ 0.56
NDEL1-201ENST00000334527 M0QZK8 103 aa18.52■□□□□ 0.55
NDEL1-201ENST00000334527 SPATA45Q537H7 98 aa18.52■□□□□ 0.55
NDEL1-201ENST00000334527 RNASEKQ6P5S7 137 aaKnown RBP18.52■□□□□ 0.55
NDEL1-201ENST00000334527 GOLT1AQ6ZVE7 132 aa18.52■□□□□ 0.55
NDEL1-201ENST00000334527 MRPL52Q86TS9 123 aaKnown RBP18.52■□□□□ 0.55
NDEL1-201ENST00000334527 RBM14Q96PK6 669 aaKnown RBP18.52■□□□□ 0.55
NDEL1-201ENST00000334527 DPM3Q9P2X0 92 aa18.51■□□□□ 0.55
NDEL1-201ENST00000334527 PTPRQQ9UMZ3 2332 aa18.51■□□□□ 0.55
NDEL1-201ENST00000334527 NBR2O15453 112 aa18.5■□□□□ 0.55
NDEL1-201ENST00000334527 CTRLP40313 264 aa18.5■□□□□ 0.55
NDEL1-201ENST00000334527 CIARTQ8N365 385 aaPredicted RBP18.5■□□□□ 0.55
NDEL1-201ENST00000334527 TPRP12270 2363 aaKnown RBP18.5■□□□□ 0.55
NDEL1-201ENST00000334527 CD24P25063 80 aa18.5■□□□□ 0.55
NDEL1-201ENST00000334527 PRNTQ86SH4 94 aa18.5■□□□□ 0.55
NDEL1-201ENST00000334527 ANKHD1Q8IWZ3 2542 aaKnown RBP18.5■□□□□ 0.55
NDEL1-201ENST00000334527 M0R2Z0 102 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 OR11H6Q8NGC7 330 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 RAB1BQ9H0U4 201 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 SOX21Q9Y651 276 aaPredicted RBP18.49■□□□□ 0.55
NDEL1-201ENST00000334527 IGLV2-11P01706 119 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 KLRD1Q13241 179 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 CDSNQ15517 529 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 RBPMS2Q6ZRY4 209 aaKnown RBP18.49■□□□□ 0.55
NDEL1-201ENST00000334527 CFHR4Q92496 578 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 SHANK2-AS3Q9BTD1 123 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 GFRA4Q9GZZ7 299 aa18.49■□□□□ 0.55
NDEL1-201ENST00000334527 COL8A1P27658 744 aa18.48■□□□□ 0.55
NDEL1-201ENST00000334527 FAM181BA6NEQ2 426 aa18.48■□□□□ 0.55
NDEL1-201ENST00000334527 Q71RC1 249 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms