RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MLNRO43193 412 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 KLRD1Q13241 179 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 IGFL4Q6B9Z1 124 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 LYZL1Q6UWQ5 148 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 Q8TAT8 98 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 LINC00477Q96M19 166 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 C17orf100A8MU93 164 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 IGHV1-2P23083 117 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 BHLHA9Q7RTU4 235 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 VMO1Q7Z5L0 202 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 IGHG4P01861 327 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 EFNB3Q15768 340 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 BMPERQ8N8U9 685 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 SCN4AP35499 1836 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 ZNF124Q15973 351 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 TMEM158Q8WZ71 300 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 UPK2O00526 184 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 VCYO14598 125 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 PILRAQ9UKJ1 303 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 EP300Q09472 2414 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-201ENST00000331920 NXPH4O95158 308 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 GAS1P54826 345 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 TMEM133Q9H2Q1 129 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 RIPPLY2Q5TAB7 128 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 ZNF525Q8N782 197 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 C1orf43Q9BWL3 253 aa13.59□□□□□ -0.23
PTCH1-201ENST00000331920 MSRB2Q9Y3D2 182 aa13.58□□□□□ -0.23
PTCH1-201ENST00000331920 SP9P0CG40 484 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 COX5BP10606 129 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 USP54Q70EL1 1684 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 GAGE12BA1L429 117 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 TSKUQ8WUA8 353 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 RTBDNQ9BSG5 229 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-201ENST00000331920 GATA4P43694 442 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 NBL1P41271 181 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 FOXG1P55316 489 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-201ENST00000331920 PSG7Q13046 419 aa13.58□□□□□ -0.24
PTCH1-201ENST00000331920 A0A0G2JMM0 328 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 A0A1W2PPB8 328 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 KIR3DP1A8MWS1 328 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 THBDP07204 575 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 TIAF1O95411 115 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 PIN1P1O15428 100 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 CRLF1O75462 422 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 LCN12Q6JVE5 192 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 PLXNA1Q9UIW2 1896 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 KLF5Q13887 457 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-201ENST00000331920 KLF17Q5JT82 389 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-201ENST00000331920 ZNF138P52744 262 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 ATRAIDQ6UW56 229 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BKO60814 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 SH2D1AO60880 128 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BJP06899 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BOP23527 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BBP33778 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BDP58876 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BCP62807 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST2H2BEQ16778 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BHQ93079 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BNQ99877 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 HIST1H2BMQ99879 126 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 A0A096LPF7 62 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 MORN2Q502X0 79 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 ZNF329Q86UD4 541 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 SMIM2Q9BVW6 85 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 MBNL3Q9NUK0 354 aaKnown RBP13.56□□□□□ -0.24
PTCH1-201ENST00000331920 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 SMPXQ9UHP9 88 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 IGHV4-4A0A075B6R2 117 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 TGFBR3LH3BV60 316 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 UCP1P25874 307 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 OSTCQ9NRP0 149 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 IGHV4-28A0A0C4DH34 117 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 BRD3OSQ6XYD6 125 aa13.56□□□□□ -0.24
PTCH1-201ENST00000331920 TMEM14DPA8MWL7 114 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 UBE2BP63146 152 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 IGHMP01871 453 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 CEACAM1P13688 526 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 PRCDQ00LT1 54 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 IFITM1P13164 125 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-201ENST00000331920 NCKAP5O14513 1909 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 IQCF6A8MYZ5 107 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 DAD1P61803 113 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 PAPPAQ13219 1627 aa13.55□□□□□ -0.24
PTCH1-201ENST00000331920 PKD1L3Q7Z443 1732 aa13.54□□□□□ -0.24
PTCH1-201ENST00000331920 WFDC9Q8NEX5 89 aa13.54□□□□□ -0.24
PTCH1-201ENST00000331920 CMC4P56277 68 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-201ENST00000331920 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
PTCH1-201ENST00000331920 CARHSP1Q9Y2V2 147 aaKnown RBP13.54□□□□□ -0.24
PTCH1-201ENST00000331920 TSC2P49815 1807 aa13.54□□□□□ -0.24
PTCH1-201ENST00000331920 TIMP3P35625 211 aa13.54□□□□□ -0.24
PTCH1-201ENST00000331920 TNFSF13O75888 250 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 DKK1O94907 266 aa13.53□□□□□ -0.24
PTCH1-201ENST00000331920 SAP25Q8TEE9 199 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms