RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 FAM168AQ92567 244 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 MCRIP2Q9BUT9 160 aaKnown RBP6.08□□□□□ -1.44
TRIM49-201ENST00000329758 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 ZNF355PQ9NSJ1 428 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 HLA-DRB4X5D2U9 266 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 SMG1Q96Q15 3661 aaKnown RBP6.08□□□□□ -1.44
TRIM49-201ENST00000329758 ANKRD11Q6UB99 2663 aaPredicted RBP6.08□□□□□ -1.44
TRIM49-201ENST00000329758 PRSS29PA6NIE9 313 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 MGST3O14880 152 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 SYNGR3O43761 229 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 CFHR2P36980 270 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 FOXA3P55318 350 aaPredicted RBP6.08□□□□□ -1.44
TRIM49-201ENST00000329758 PLP2Q04941 152 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 FHL3Q13643 280 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 Q6ZR03 302 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 TMEM178AQ8NBL3 297 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 FOXB1Q99853 325 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 SLC25A33Q9BSK2 321 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 CHAC1Q9BUX1 264 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 DEFB127Q9H1M4 99 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 AP5S1Q9NUS5 200 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 LSM4Q9Y4Z0 139 aaKnown RBP6.08□□□□□ -1.44
TRIM49-201ENST00000329758 PTPRBP23467 1997 aa6.08□□□□□ -1.44
TRIM49-201ENST00000329758 TRAV25A0A0B4J276 109 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 SHISA9B4DS77 424 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 GGTLC3B5MD39 225 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 PRSS46E5RG02 174 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 FNDC10F2Z333 226 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 M0QXV9 152 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 NCR2O95944 276 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 NDUFV3P56181 108 aaKnown RBP6.07□□□□□ -1.44
TRIM49-201ENST00000329758 FAM27BQ5VT28 67 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 CEND1Q8N111 149 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 ZNF808Q8N4W9 903 aaPredicted RBP6.07□□□□□ -1.44
TRIM49-201ENST00000329758 DRAM1Q8N682 238 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 PPP1R35Q8TAP8 253 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 NRGNQ92686 78 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 TMUB1Q9BVT8 246 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 TTTY12Q9BZ98 90 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 MAP1LC3AQ9H492 121 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 PLEKHA3Q9HB20 300 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
TRIM49-201ENST00000329758 IGHV3-64DA0A0J9YX35 117 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 K7ERJ3 54 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 BCL3P20749 454 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 RPS16P62249 146 aaKnown RBP6.07□□□□□ -1.44
TRIM49-201ENST00000329758 RPL30P62888 115 aaKnown RBP6.07□□□□□ -1.44
TRIM49-201ENST00000329758 PLGLB1Q02325 96 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 RRN3P1Q2M238 152 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 CFAP126Q5VTH2 177 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 HS3ST6Q96QI5 342 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 OR2H1Q9GZK4 316 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 GFRA4Q9GZZ7 299 aa6.07□□□□□ -1.44
TRIM49-201ENST00000329758 MAP1BP46821 2468 aaKnown RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 TRAV5A0A0B4J249 113 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 NPIPB6E9PJ23 425 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 CCDC179H3BU77 68 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 SLC25A5P05141 298 aaKnown RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 MPV17P39210 176 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 TRAT1Q6PIZ9 186 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 FAM214BQ7L5A3 538 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 H2BFWTQ7Z2G1 175 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 TMEM116Q8NCL8 245 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 DEFB124Q8NES8 71 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PIGCQ92535 297 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRRG4Q9BZD6 226 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 C7orf69Q9H7B7 122 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 FAM90A27PA6NNH2 459 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 NPIPB5A8MRT5 1133 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 CHEK1O14757 476 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 MRPL33O75394 65 aaKnown RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 WT1P19544 449 aaPredicted RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRTN3P24158 256 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 FKBP2P26885 142 aaKnown RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 NMUP48645 174 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 MEOX1P50221 254 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRR20EP86478 221 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRR20CP86479 221 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRR20DP86480 221 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRR20BP86481 221 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRR20AP86496 221 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 DIAPH2-AS1Q14236 149 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 TM4SF20Q53R12 229 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 PRR30Q53SZ7 412 aaPredicted RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 MIR17HGQ75NE6 70 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 FAM173AQ9BQD7 235 aa6.06□□□□□ -1.44
TRIM49-201ENST00000329758 F11RQ9Y624 299 aaKnown RBP6.06□□□□□ -1.44
TRIM49-201ENST00000329758 C5orf49A4QMS7 147 aa6.05□□□□□ -1.44
TRIM49-201ENST00000329758 HSPB6O14558 160 aa6.05□□□□□ -1.44
TRIM49-201ENST00000329758 ZZEF1O43149 2961 aa6.05□□□□□ -1.44
TRIM49-201ENST00000329758 NGFP01138 241 aa6.05□□□□□ -1.44
TRIM49-201ENST00000329758 APOHP02749 345 aaPredicted RBP6.05□□□□□ -1.44
TRIM49-201ENST00000329758 RBP4P02753 201 aa6.05□□□□□ -1.44
TRIM49-201ENST00000329758 ZNF688P0C7X2 276 aa6.05□□□□□ -1.44
TRIM49-201ENST00000329758 HOXA4Q00056 320 aaPredicted RBP6.05□□□□□ -1.44
TRIM49-201ENST00000329758 KRTAP27-1Q3LI81 207 aa6.05□□□□□ -1.44
TRIM49-201ENST00000329758 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms