RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 SH2D1AO60880 128 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
FNDC1-202ENST00000329629 LINC01551Q86U37 167 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 ZNF138P52744 262 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 UBE2V1Q13404 147 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 PLEKHB2Q96CS7 222 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
FNDC1-202ENST00000329629 LCTP09848 1927 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 FAM90A9PA6NNJ1 464 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 SMKR1H3BMG3 65 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 IGHV3-53P01767 116 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 TEX43Q6ZNM6 134 aa11.62□□□□□ -0.55
FNDC1-202ENST00000329629 PRSS22Q9GZN4 317 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 DNAJC13O75165 2243 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 J3QRE1 110 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 FGFBP3Q8TAT2 258 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 MBNL3Q9NUK0 354 aaKnown RBP11.61□□□□□ -0.55
FNDC1-202ENST00000329629 FLVCR1-AS1Q8TAF5 88 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 SPRR3Q9UBC9 169 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 PSG3Q16557 428 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 PYY3Q5JQD4 70 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 AGMATQ9BSE5 352 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
FNDC1-202ENST00000329629 PDCD11Q14690 1871 aaKnown RBP11.6□□□□□ -0.55
FNDC1-202ENST00000329629 INS-IGF2F8WCM5 200 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 INSP01308 110 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 TMEM158Q8WZ71 300 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 IGHV1-18A0A0C4DH31 117 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 SYS1-DBNDD2H3BUS1 97 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 RPRMLQ8N4K4 120 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 Q8TAT8 98 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 PRADC1Q9BSG0 188 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 ASCL4Q6XD76 172 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 DTX2Q86UW9 622 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 CSTL1Q9H114 145 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 SBF1O95248 1867 aa11.6□□□□□ -0.55
FNDC1-202ENST00000329629 TRAV3A0A0B4J244 114 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 FBLN5Q9UBX5 448 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 RPUSD1Q9UJJ7 312 aaKnown RBP11.59□□□□□ -0.55
FNDC1-202ENST00000329629 IGKV1-12A0A0C4DH73 117 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 GAGE12BA1L429 117 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 LYPD3O95274 346 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 IGKV1D-12P01611 117 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 NDPQ00604 133 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 ZNF664Q8N3J9 261 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 RASL10AQ92737 203 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 MDC1Q14676 2089 aaKnown RBP11.59□□□□□ -0.55
FNDC1-202ENST00000329629 A0A1B0GW64 132 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 GNLYP22749 145 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 PINLYPA6NC86 204 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 C9JAW5 83 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 RASL11AQ6T310 242 aa11.59□□□□□ -0.55
FNDC1-202ENST00000329629 CHAC1Q9BUX1 264 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.58□□□□□ -0.56
FNDC1-202ENST00000329629 LEPROTO15243 131 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 THBDP07204 575 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 SUPT4H1P63272 117 aaKnown RBP11.58□□□□□ -0.56
FNDC1-202ENST00000329629 C15orf32Q32M92 178 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 C5orf24Q7Z6I8 188 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 TMEM219Q86XT9 240 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 SPTBP11277 2137 aa11.58□□□□□ -0.56
FNDC1-202ENST00000329629 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 KLRD1Q13241 179 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 LINC01559Q495D7 138 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 A0A087WX48 190 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 C14orf178Q8N769 122 aaPredicted RBP11.57□□□□□ -0.56
FNDC1-202ENST00000329629 WNT2P09544 360 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 RPP25LQ8N5L8 163 aaKnown RBP11.57□□□□□ -0.56
FNDC1-202ENST00000329629 SRRM4A7MD48 611 aaKnown RBP11.57□□□□□ -0.56
FNDC1-202ENST00000329629 EREGO14944 169 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 IGHV1-46P01743 117 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 ABCA7Q8IZY2 2146 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 SPXQ9BT56 116 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 HEATR5BQ9P2D3 2071 aa11.57□□□□□ -0.56
FNDC1-202ENST00000329629 IGHV2-26A0A0B4J1V2 119 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 SELLP14151 372 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 THSD7BQ9C0I4 1608 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 LINC01549A6NIU2 74 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 VMO1Q7Z5L0 202 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 ERCC8Q13216 396 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 IGKV1-27A0A075B6S5 117 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 TRAV1-1A0A0B4J248 108 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 C1orf159Q96HA4 380 aa11.56□□□□□ -0.56
FNDC1-202ENST00000329629 F8WEM9 126 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 ZC2HC1BQ5TFG8 222 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 A0A087WWL8 130 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 VCYO14598 125 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 SAP30O75446 220 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 AMN1Q8IY45 258 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 RSPO3Q9BXY4 272 aaPredicted RBP11.55□□□□□ -0.56
FNDC1-202ENST00000329629 RPL35AP18077 110 aaKnown RBP11.55□□□□□ -0.56
FNDC1-202ENST00000329629 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 TMEM200BQ69YZ2 307 aa11.55□□□□□ -0.56
FNDC1-202ENST00000329629 UBE2DNLQ8IWF7 75 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms