RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 SRSF4Q08170 494 aaKnown RBP12.67□□□□□ -0.38
PTPN21-201ENST00000328736 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
PTPN21-201ENST00000328736 ITGB1BP1O14713 200 aa12.67□□□□□ -0.38
PTPN21-201ENST00000328736 GFI1Q99684 422 aa12.67□□□□□ -0.38
PTPN21-201ENST00000328736 GSN-AS1Q9NRJ2 163 aa12.67□□□□□ -0.38
PTPN21-201ENST00000328736 F8VVB4 439 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 F8VWA3 439 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 FXYD7P58549 80 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 HIST1H4AP62805 103 aaKnown RBP12.66□□□□□ -0.38
PTPN21-201ENST00000328736 C5orf64Q2M2E5 130 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 D6R8Y8 96 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 FCN3O75636 299 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 MYMXA0A1B0GTQ4 84 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 UNQ6494/PRO21346Q6UXR6 183 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 KLHDC3Q9BQ90 382 aa12.66□□□□□ -0.38
PTPN21-201ENST00000328736 SH2D1AO60880 128 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 LYZL1Q6UWQ5 148 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 DOCK4Q8N1I0 1966 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 BUB1B-PAK6H3BSN5 160 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 GZMBP10144 247 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 ZNF474Q6S9Z5 364 aaPredicted RBP12.65□□□□□ -0.38
PTPN21-201ENST00000328736 SIGMAR1Q99720 223 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 ANAPC10Q9UM13 185 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 PRR31Q5SQ13 230 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 BRD3OSQ6XYD6 125 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 EXOC3-AS1Q8N2X6 119 aa12.65□□□□□ -0.38
PTPN21-201ENST00000328736 LYPD1Q8N2G4 141 aa12.65□□□□□ -0.39
PTPN21-201ENST00000328736 ANK1P16157 1881 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 PSG3Q16557 428 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 C5orf24Q7Z6I8 188 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 IGKV1D-8A0A087WSZ0 117 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 FOXG1P55316 489 aaPredicted RBP12.64□□□□□ -0.39
PTPN21-201ENST00000328736 TMEM155Q4W5P6 130 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 GGNQ86UU5 652 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 H0YJW9 148 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 TCRAP04437 139 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 AMBPP02760 352 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 WFDC1Q9HC57 220 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 TMEM242Q9NWH2 141 aa12.64□□□□□ -0.39
PTPN21-201ENST00000328736 A0A0G2JNJ9 132 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 NDUFS8O00217 210 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 TNFSF13O75888 250 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 SUPT4H1P63272 117 aaKnown RBP12.63□□□□□ -0.39
PTPN21-201ENST00000328736 LCN12Q6JVE5 192 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 CSTL1Q9H114 145 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 Q9UFV3 132 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 NCR2O95944 276 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 RIPPLY3P57055 190 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 NDPQ00604 133 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 TMEM249Q2WGJ8 235 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 CD177Q8N6Q3 437 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 C1orf159Q96HA4 380 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 SRSF8Q9BRL6 282 aaKnown RBP12.63□□□□□ -0.39
PTPN21-201ENST00000328736 COL4A6Q14031 1691 aa12.63□□□□□ -0.39
PTPN21-201ENST00000328736 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
PTPN21-201ENST00000328736 MGST2Q99735 147 aa12.62□□□□□ -0.39
PTPN21-201ENST00000328736 RFNGQ9Y644 331 aa12.62□□□□□ -0.39
PTPN21-201ENST00000328736 GATA3P23771 443 aa12.62□□□□□ -0.39
PTPN21-201ENST00000328736 FAM90A2PQ658T7 463 aa12.62□□□□□ -0.39
PTPN21-201ENST00000328736 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
PTPN21-201ENST00000328736 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
PTPN21-201ENST00000328736 HOXD3P31249 432 aaPredicted RBP12.62□□□□□ -0.39
PTPN21-201ENST00000328736 MDC1Q14676 2089 aaKnown RBP12.61□□□□□ -0.39
PTPN21-201ENST00000328736 J3QRE1 110 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 CRIPAKQ8N1N5 446 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 EREGO14944 169 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 EFNA2O43921 213 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 PAQR4Q8N4S7 273 aaPredicted RBP12.61□□□□□ -0.39
PTPN21-201ENST00000328736 SPATA31B1PQ5VZV4 182 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 RHPN1-AS1Q9BWJ2 59 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 EDA2RQ9HAV5 297 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 LY6G6FQ5SQ64 297 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 NABP1Q96AH0 204 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 TIMM21Q9BVV7 248 aa12.61□□□□□ -0.39
PTPN21-201ENST00000328736 DAZ1Q9NQZ3 744 aaKnown RBP12.61□□□□□ -0.39
PTPN21-201ENST00000328736 MST1P26927 711 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 IGKV1-12A0A0C4DH73 117 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 FGF16O43320 207 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 IGKV1D-12P01611 117 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 SSBP2P81877 361 aaPredicted RBP12.6□□□□□ -0.39
PTPN21-201ENST00000328736 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 KNTC1P50748 2209 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
PTPN21-201ENST00000328736 LY96Q9Y6Y9 160 aa12.6□□□□□ -0.39
PTPN21-201ENST00000328736 LY6G5BQ8NDX9 201 aa12.59□□□□□ -0.39
PTPN21-201ENST00000328736 SIGLEC9Q9Y336 463 aa12.59□□□□□ -0.39
PTPN21-201ENST00000328736 MBD3L4A6NDZ8 208 aaPredicted RBP12.59□□□□□ -0.39
PTPN21-201ENST00000328736 MBD3L3A6NE82 208 aaPredicted RBP12.59□□□□□ -0.39
PTPN21-201ENST00000328736 MBD3L5A6NJ08 208 aaPredicted RBP12.59□□□□□ -0.39
PTPN21-201ENST00000328736 SELLP14151 372 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms