RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 AMY1AP04745 511 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 OR10J1P30954 320 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 NDPQ00604 133 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 CATR1Q13166 79 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 ADIRFQ15847 76 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 TNXAQ16473 311 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 PRAMEF5Q5TYX0 476 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 MOGAT3Q86VF5 341 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 RFESDQ8TAC1 157 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 SIGLEC9Q9Y336 463 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 USP9XQ93008 2570 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-201ENST00000315544 FAM181BA6NEQ2 426 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 NBR2O15453 112 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 FAM106CPP0CH98 169 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 IGLL1P15814 213 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 CRYBB3P26998 211 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 RPS16P62249 146 aaKnown RBP6.06□□□□□ -1.44
CNOT4-201ENST00000315544 FAM106AQ4KMX7 169 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 Q86TA4 180 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 BTF3L4Q96K17 158 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 NRN1Q9NPD7 142 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 PYYP10082 97 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 APOBEC3AP31941 199 aaPredicted RBP6.06□□□□□ -1.44
CNOT4-201ENST00000315544 EDDM3BP56851 147 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 KRTAP10-9P60411 292 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 CFHR3Q02985 330 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 FKBP11Q9NYL4 201 aa6.06□□□□□ -1.44
CNOT4-201ENST00000315544 F11RQ9Y624 299 aaKnown RBP6.06□□□□□ -1.44
CNOT4-201ENST00000315544 C17orf112F2Z3M2 114 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 NCR2O95944 276 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 MOSP00540 346 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 AKR1D1P51857 326 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 RPS20P60866 119 aaKnown RBP6.05□□□□□ -1.44
CNOT4-201ENST00000315544 PLGLB1Q02325 96 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 FAM27E3Q08E93 113 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 C10orf55Q5SWW7 151 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 ZNF491Q8N8L2 437 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 ZC4H2Q9NQZ6 224 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 ARID1AO14497 2285 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 BUB1B-PAK6H3BSN5 160 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 C8orf88P0DMB2 117 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 CCL3L1P16619 93 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 NECAP1Q8NC96 275 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 ZC2HC1AQ96GY0 325 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 GRAMD2BQ96HH9 432 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 CA1P00915 261 aaPredicted RBP6.05□□□□□ -1.44
CNOT4-201ENST00000315544 MT-ND6P03923 174 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 CASP6P55212 293 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 PLP2Q04941 152 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 RND1Q92730 232 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 CBLN4Q9NTU7 201 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 RNF7Q9UBF6 113 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 EPDR1Q9UM22 224 aa6.05□□□□□ -1.44
CNOT4-201ENST00000315544 TRBV19A0A075B6N1 114 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 TRAV8-2A0A0B4J237 113 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 IGHV2-70DA0A0C4DH43 119 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 IGHV7-4-1A0A0J9YVY3 117 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 RNF5Q99942 180 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 TRAPPC1Q9Y5R8 145 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 ACACBO00763 2458 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 M0R1X1 148 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 GAS8-AS1O95177 125 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 LOXL1Q08397 574 aaPredicted RBP6.04□□□□□ -1.44
CNOT4-201ENST00000315544 LCNL1Q6ZST4 164 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 SSMEM1Q8WWF3 244 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 RNF2Q99496 336 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 ATG101Q9BSB4 218 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 ZFP30Q9Y2G7 519 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 TBL2Q9Y4P3 447 aaKnown RBP6.04□□□□□ -1.44
CNOT4-201ENST00000315544 A0A1W2PPQ1 181 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 PEX7O00628 323 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 ZNF80P51504 273 aaPredicted RBP6.04□□□□□ -1.44
CNOT4-201ENST00000315544 RTL8BQ17RB0 113 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 TTC9CQ8N5M4 171 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 SCGB1C1Q8TD33 95 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 VN1R17PQ8TDU5 208 aa6.04□□□□□ -1.44
CNOT4-201ENST00000315544 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 IGHV3-64DA0A0J9YX35 117 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 CCL21O00585 134 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 ZNF253O75346 499 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 NXPH4O95158 308 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 IFNA1P01562 189 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 TCRAP04437 139 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 USF1P22415 310 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-201ENST00000315544 TSPOP30536 169 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 IQCJQ1A5X6 159 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 IL17RELQ6ZVW7 336 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 EPG5Q9HCE0 2579 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 LOC102724200A0A096LPH7 203 aaPredicted RBP6.03□□□□□ -1.44
CNOT4-201ENST00000315544 NPIPB5A8MRT5 1133 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 ORAOV1Q8WV07 137 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 TMEM18Q96B42 140 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 SIRPDQ9H106 197 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 TMEM167BQ9NRX6 74 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 ZNF355PQ9NSJ1 428 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 C11orf21Q9P2W6 132 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 LINC00315P59091 139 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 TMEM186Q96B77 213 aa6.03□□□□□ -1.44
CNOT4-201ENST00000315544 UNC79Q9P2D8 2635 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms