RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
RFFL-201ENST00000315249 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
RFFL-201ENST00000315249 NMBP08949 121 aa11.01□□□□□ -0.65
RFFL-201ENST00000315249 A0A087WX48 190 aa11□□□□□ -0.65
RFFL-201ENST00000315249 SRSF4Q08170 494 aaKnown RBP11□□□□□ -0.65
RFFL-201ENST00000315249 RNF5Q99942 180 aa11□□□□□ -0.65
RFFL-201ENST00000315249 PRDM13Q9H4Q3 707 aa11□□□□□ -0.65
RFFL-201ENST00000315249 TMEM131Q92545 1883 aa11□□□□□ -0.65
RFFL-201ENST00000315249 GFI1Q99684 422 aa11□□□□□ -0.65
RFFL-201ENST00000315249 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
RFFL-201ENST00000315249 DSCAMO60469 2012 aa11□□□□□ -0.65
RFFL-201ENST00000315249 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
RFFL-201ENST00000315249 A6NJY4 79 aa11□□□□□ -0.65
RFFL-201ENST00000315249 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
RFFL-201ENST00000315249 C11orf68Q9H3H3 251 aaKnown RBP11□□□□□ -0.65
RFFL-201ENST00000315249 FBLN5Q9UBX5 448 aa11□□□□□ -0.65
RFFL-201ENST00000315249 WNK1Q9H4A3 2382 aa11□□□□□ -0.65
RFFL-201ENST00000315249 CIDEAO60543 219 aa11□□□□□ -0.65
RFFL-201ENST00000315249 COX6CP09669 75 aa11□□□□□ -0.65
RFFL-201ENST00000315249 CFHR2P36980 270 aa11□□□□□ -0.65
RFFL-201ENST00000315249 EPDR1Q9UM22 224 aa11□□□□□ -0.65
RFFL-201ENST00000315249 SRRM4A7MD48 611 aaKnown RBP11□□□□□ -0.65
RFFL-201ENST00000315249 OVOL3O00110 214 aa11□□□□□ -0.65
RFFL-201ENST00000315249 DEFB104AQ8WTQ1 72 aa11□□□□□ -0.65
RFFL-201ENST00000315249 PSG8Q9UQ74 426 aa11□□□□□ -0.65
RFFL-201ENST00000315249 IGKV1-16P04430 117 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 DMRTC2Q8IXT2 367 aaPredicted RBP10.99□□□□□ -0.65
RFFL-201ENST00000315249 COPS9Q8WXC6 57 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 CLDN16Q9Y5I7 305 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 TMEM50AO95807 157 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 RNASE7Q9H1E1 156 aaKnown RBP10.99□□□□□ -0.65
RFFL-201ENST00000315249 A6NDN8 102 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 J3QLI3 93 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 DUX4L9Q6RFH8 374 aaPredicted RBP10.99□□□□□ -0.65
RFFL-201ENST00000315249 SLX1AQ9BQ83 275 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 LINC00862A6NCI5 91 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 LINC00473A8K010 186 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 CD5P06127 495 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 EFNB3Q15768 340 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 A0A1B0GWJ7 208 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 RHPN1-AS1Q9BWJ2 59 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 DEFB130BP0DP73 79 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 DEFB130AP0DP74 79 aa10.99□□□□□ -0.65
RFFL-201ENST00000315249 TRAF4Q9BUZ4 470 aaPredicted RBP10.99□□□□□ -0.65
RFFL-201ENST00000315249 CNTFRP26992 372 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 FAM90A9PA6NNJ1 464 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 CACNG7P62955 275 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 IGFL4Q6B9Z1 124 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 ST20Q9HBF5 79 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 E9PQ18 207 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 LINC01619G3V211 115 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 NHLRC3Q5JS37 347 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 EVI2AP22794 236 aa10.98□□□□□ -0.65
RFFL-201ENST00000315249 DEFB131AP59861 70 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 C1QTNF4Q9BXJ3 329 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 JKAMPQ9P055 326 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 G3V318 75 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 TMEM250H0YL14 139 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 H3BRM9 83 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 APOHP02749 345 aaPredicted RBP10.97□□□□□ -0.65
RFFL-201ENST00000315249 LCN12Q6JVE5 192 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 CHD3Q12873 2000 aaKnown RBP10.97□□□□□ -0.65
RFFL-201ENST00000315249 ADARB2-AS1A8MUL3 147 aa10.97□□□□□ -0.65
RFFL-201ENST00000315249 ZNF25P17030 456 aaPredicted RBP10.97□□□□□ -0.65
RFFL-201ENST00000315249 FBLL1A6NHQ2 334 aaKnown RBP10.97□□□□□ -0.65
RFFL-201ENST00000315249 RPL24P83731 157 aaKnown RBP10.97□□□□□ -0.65
RFFL-201ENST00000315249 FOLR2P14207 255 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 ARTNQ5T4W7 220 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 HS3ST6Q96QI5 342 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 CSPG4Q6UVK1 2322 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 ZNF503-AS2A6NEH8 195 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 Q6ZR03 302 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 SDHCQ99643 169 aaPredicted RBP10.96□□□□□ -0.65
RFFL-201ENST00000315249 OR11H1Q8NG94 326 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 VCX2Q9H322 139 aa10.96□□□□□ -0.65
RFFL-201ENST00000315249 TRAV8-6A0A0B4J262 113 aa10.96□□□□□ -0.66
RFFL-201ENST00000315249 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.66
RFFL-201ENST00000315249 NDUFA3O95167 84 aa10.96□□□□□ -0.66
RFFL-201ENST00000315249 NAPSAO96009 420 aa10.96□□□□□ -0.66
RFFL-201ENST00000315249 IL36BQ9NZH7 164 aa10.96□□□□□ -0.66
RFFL-201ENST00000315249 TNRC6AQ8NDV7 1962 aaKnown RBP10.95□□□□□ -0.66
RFFL-201ENST00000315249 EFNB1P98172 346 aa10.95□□□□□ -0.66
RFFL-201ENST00000315249 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
RFFL-201ENST00000315249 SPATA45Q537H7 98 aa10.95□□□□□ -0.66
RFFL-201ENST00000315249 MRPS16Q9Y3D3 137 aaKnown RBP10.95□□□□□ -0.66
RFFL-201ENST00000315249 VENTXO95231 258 aa10.95□□□□□ -0.66
RFFL-201ENST00000315249 C11orf91Q3C1V1 193 aa10.95□□□□□ -0.66
RFFL-201ENST00000315249 ZNF414Q96IQ9 312 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 INSP01308 110 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 PUSL1Q8N0Z8 303 aaKnown RBP10.94□□□□□ -0.66
RFFL-201ENST00000315249 TRBV9A0A0B4J1U6 114 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 ZNF98A6NK75 572 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 IFI27P40305 119 aaPredicted RBP10.94□□□□□ -0.66
RFFL-201ENST00000315249 CFHR3Q02985 330 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms