RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 NOTCH2Q04721 2471 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 SERF1AO75920 110 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 PPIFP30405 207 aaKnown RBP9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 RPL15P61313 204 aaKnown RBP9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 SSBP4Q9BWG4 385 aaPredicted RBP9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 SCRT1Q9BWW7 348 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 SEPSECSQ9HD40 501 aaKnown RBP9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 FNDC1Q4ZHG4 1894 aaPredicted RBP9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 TRAV3A0A0B4J244 114 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 LY6G6EA0A0G2JKS1 128 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 LY6HO94772 140 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 KLF17Q5JT82 389 aaPredicted RBP9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 LYPD2Q6UXB3 125 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 VSIRQ9H7M9 311 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 U3KQA8 63 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 ARFGEF3Q5TH69 2177 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 ZFHX2Q9C0A1 2572 aaPredicted RBP9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 NRN1Q9NPD7 142 aa9.78□□□□□ -0.84
AMBRA1-201ENST00000314845 PTPRQQ9UMZ3 2332 aa9.77□□□□□ -0.84
AMBRA1-201ENST00000314845 PGPEP1LA6NFU8 196 aa9.77□□□□□ -0.84
AMBRA1-201ENST00000314845 ZNF688P0C7X2 276 aa9.77□□□□□ -0.84
AMBRA1-201ENST00000314845 MALP21145 153 aa9.77□□□□□ -0.84
AMBRA1-201ENST00000314845 C14orf144Q96I85 54 aa9.77□□□□□ -0.84
AMBRA1-201ENST00000314845 SAA4P35542 130 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 ZNF138P52744 262 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 CTAG1AP78358 180 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 RPP25LQ8N5L8 163 aaKnown RBP9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 GNB1LQ9BYB4 327 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 FAM223BA6NKX1 122 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 LINC00614P0C842 121 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 TTC32Q5I0X7 151 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 SP5Q6BEB4 398 aaPredicted RBP9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 ATRAIDQ6UW56 229 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 FAM223AQ8IWN6 122 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 PRR30Q53SZ7 412 aaPredicted RBP9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 AGMATQ9BSE5 352 aa9.77□□□□□ -0.85
AMBRA1-201ENST00000314845 GHRHP01286 108 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 RNF144BQ7Z419 303 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 DTX1Q86Y01 620 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 MGST2Q99735 147 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 NDUFA3O95167 84 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 TCRAP04437 139 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 MSMBP08118 114 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 CEACAM8P31997 349 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 CHCHD5Q9BSY4 110 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 RNF114Q9Y508 228 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 TRBV7-9A0A0J9YWB2 115 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 PCNX2A6NKB5 2137 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 LYPD1Q8N2G4 141 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 IGKV2-40A0A087WW87 121 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 IGKV2D-40P01614 121 aaPredicted RBP9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 EXOC3-AS1Q8N2X6 119 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 KIR3DL3Q8N743 410 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 TMEM242Q9NWH2 141 aa9.76□□□□□ -0.85
AMBRA1-201ENST00000314845 RBMY1BA6NDE4 496 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 RBMY1EA6NEQ0 496 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 CRPP02741 224 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 RBMY1DP0C7P1 496 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 RBMY1A1P0DJD3 496 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 RBMY1CP0DJD4 496 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 GATA4P43694 442 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 ARTNQ5T4W7 220 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 NUDT10Q8NFP7 164 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 NUDT11Q96G61 164 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 SHANK1Q9Y566 2161 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 TP53BP1Q12888 1972 aaPredicted RBP9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 SRRM4A7MD48 611 aaKnown RBP9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 FNDC10F2Z333 226 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 BEND2Q8NDZ0 799 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 RFNGQ9Y644 331 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 ADMP35318 185 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 UBE2E1P51965 193 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 ERVK11-1P61568 191 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 FHL1Q13642 323 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 SPATA31B1PQ5VZV4 182 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 KLHL30-AS1Q8NEE0 82 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 PRADC1Q9BSG0 188 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 DPM2O94777 84 aa9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
AMBRA1-201ENST00000314845 CD28P10747 220 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 SRSF3P84103 164 aaKnown RBP9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 ZNF562Q6V9R5 426 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 Q8TCH9 128 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 CYTL1Q9NRR1 136 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 TRBV24-1A0A075B6N3 115 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 A0A087WX48 190 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 APOMO95445 188 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 RNASE2P10153 161 aaKnown RBP9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 LMO1P25800 156 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 NBL1P41271 181 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 LCNL1Q6ZST4 164 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 RCHY1Q96PM5 261 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 SNAI2O43623 268 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 WFDC12Q8WWY7 111 aa9.74□□□□□ -0.85
AMBRA1-201ENST00000314845 NCOR1P1Q9H4R4 102 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms