RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CHRDL1Q9BU40 450 aa13.03□□□□□ -0.32
CLCF1-201ENST00000312438 GGTLC3B5MD39 225 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.32
CLCF1-201ENST00000312438 GP9P14770 177 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 ADMP35318 185 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 ADIRFQ15847 76 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 LEMD1Q68G75 181 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 C15orf54Q8N8G6 183 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 DERL1Q9BUN8 251 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 TMEM242Q9NWH2 141 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 ZNF580Q9UK33 172 aa13.02□□□□□ -0.32
CLCF1-201ENST00000312438 APCP25054 2843 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 H3BRN7 92 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 TRGV3P03979 118 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 CRYBB3P26998 211 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 GPR183P32249 361 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 USF2Q15853 346 aaPredicted RBP13.02□□□□□ -0.33
CLCF1-201ENST00000312438 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 Q6ZS46 218 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 NOL4LQ96MY1 436 aaPredicted RBP13.02□□□□□ -0.33
CLCF1-201ENST00000312438 RNF24Q9Y225 148 aa13.02□□□□□ -0.33
CLCF1-201ENST00000312438 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 COLCA2A8K830 154 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 S100A7P31151 101 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 CLEC19AQ6UXS0 136 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 BPIFA4PQ86YQ2 179 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 CTDSP1Q9GZU7 261 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 VPREB3Q9UKI3 123 aa13.01□□□□□ -0.33
CLCF1-201ENST00000312438 HELTA6NFD8 242 aa13□□□□□ -0.33
CLCF1-201ENST00000312438 MT-ND4LP03901 98 aa13□□□□□ -0.33
CLCF1-201ENST00000312438 HIST1H1EP10412 219 aaKnown RBP13□□□□□ -0.33
CLCF1-201ENST00000312438 RANP62826 216 aaKnown RBP13□□□□□ -0.33
CLCF1-201ENST00000312438 BLNKQ8WV28 456 aa13□□□□□ -0.33
CLCF1-201ENST00000312438 ISOC2Q96AB3 205 aa13□□□□□ -0.33
CLCF1-201ENST00000312438 USMG5Q96IX5 58 aa13□□□□□ -0.33
CLCF1-201ENST00000312438 TCEAL7Q9BRU2 100 aa13□□□□□ -0.33
CLCF1-201ENST00000312438 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
CLCF1-201ENST00000312438 HELZ2Q9BYK8 2649 aaKnown RBP13□□□□□ -0.33
CLCF1-201ENST00000312438 ZNF98A6NK75 572 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 MYCNOSP40205 109 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 LINC01551Q86U37 167 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 CR1P17927 2039 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 MAP1AP78559 2803 aaPredicted RBP12.99□□□□□ -0.33
CLCF1-201ENST00000312438 BMPR1BO00238 502 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 TGOLN2O43493 480 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 RPL35P42766 123 aaKnown RBP12.99□□□□□ -0.33
CLCF1-201ENST00000312438 TPPP2P59282 170 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 RNF212Q495C1 297 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 ZNF329Q86UD4 541 aa12.99□□□□□ -0.33
CLCF1-201ENST00000312438 PRRC2AP48634 2157 aaKnown RBP12.99□□□□□ -0.33
CLCF1-201ENST00000312438 C9JCJ5 164 aa12.98□□□□□ -0.33
CLCF1-201ENST00000312438 CLDN34H7C241 214 aa12.98□□□□□ -0.33
CLCF1-201ENST00000312438 HOXA3O43365 443 aaPredicted RBP12.98□□□□□ -0.33
CLCF1-201ENST00000312438 IGLV1-40P01703 118 aa12.98□□□□□ -0.33
CLCF1-201ENST00000312438 SNRPCP09234 159 aaKnown RBP12.98□□□□□ -0.33
CLCF1-201ENST00000312438 OR4F17Q8NGA8 305 aa12.98□□□□□ -0.33
CLCF1-201ENST00000312438 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
CLCF1-201ENST00000312438 RABAC1Q9UI14 185 aa12.98□□□□□ -0.33
CLCF1-201ENST00000312438 LY96Q9Y6Y9 160 aa12.98□□□□□ -0.33
CLCF1-201ENST00000312438 TRBV20OR9-2A0A075B6H5 130 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 PGPA6NDG6 321 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 RELQ04864 619 aaPredicted RBP12.97□□□□□ -0.33
CLCF1-201ENST00000312438 TOMM20LQ6UXN7 152 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 HIST1H2BAQ96A08 127 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 ANAPC16Q96DE5 110 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 GNB4Q9HAV0 340 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 ZNF586Q9NXT0 402 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 PF4V1P10720 104 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 CFHR3Q02985 330 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 FAM24BQ8N5W8 94 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 OCC1Q8TAD7 63 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 PRSS22Q9GZN4 317 aa12.97□□□□□ -0.33
CLCF1-201ENST00000312438 A0A0G2JLM5 398 aa12.96□□□□□ -0.33
CLCF1-201ENST00000312438 TMEM190Q8WZ59 177 aa12.96□□□□□ -0.33
CLCF1-201ENST00000312438 ZNF414Q96IQ9 312 aa12.96□□□□□ -0.33
CLCF1-201ENST00000312438 EPDR1Q9UM22 224 aa12.96□□□□□ -0.33
CLCF1-201ENST00000312438 CSPG4Q6UVK1 2322 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 TRBV19A0A075B6N1 114 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 IGHV3-35A0A0C4DH35 117 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 MRPS12O15235 138 aaKnown RBP12.95□□□□□ -0.34
CLCF1-201ENST00000312438 IGLC2P0DOY2 106 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 CD99P14209 185 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 RAB9AP51151 201 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 TAS2R60P59551 318 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 YPEL4Q96NS1 127 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 NPFFR1Q9GZQ6 430 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 KLK15Q9H2R5 256 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 Q9H3A6 140 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 ZFAND3Q9H8U3 227 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 PEX7O00628 323 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 CD5LO43866 347 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 SLC25A5P05141 298 aaKnown RBP12.95□□□□□ -0.34
CLCF1-201ENST00000312438 RPL7P18124 248 aaKnown RBP12.95□□□□□ -0.34
CLCF1-201ENST00000312438 GNG4P50150 75 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 LYPD1Q8N2G4 141 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 OTORQ9NRC9 128 aa12.95□□□□□ -0.34
CLCF1-201ENST00000312438 TMEM89A2RUT3 159 aa12.94□□□□□ -0.34
CLCF1-201ENST00000312438 H3BTX0 84 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms