RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 OR51M1Q9H341 326 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 MRPL27Q9P0M9 148 aaKnown RBP9.29□□□□□ -0.92
TRIM40-205ENST00000307859 FBXL7Q9UJT9 491 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 PITPNC1Q9UKF7 332 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 HIGD1AQ9Y241 93 aa9.29□□□□□ -0.92
TRIM40-205ENST00000307859 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 GGTLC3B5MD39 225 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 INAFM1C9JVW0 142 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 G3V318 75 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 PYYP10082 97 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 ZNF491Q8N8L2 437 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 TMEM158Q8WZ71 300 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 YPEL4Q96NS1 127 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 DERL1Q9BUN8 251 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 TMEM242Q9NWH2 141 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 S4R3C0 116 aa9.28□□□□□ -0.92
TRIM40-205ENST00000307859 OR2C1O95371 312 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 IGF1P05019 195 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 GP9P14770 177 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 LY6EQ16553 131 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 Q56UQ5 140 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 ZNF343Q6P1L6 599 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 ZNF502Q8TBZ5 544 aa9.27□□□□□ -0.92
TRIM40-205ENST00000307859 TRAV41A0A0B4J266 112 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 MDFIC2A0A1B0GVS7 189 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 CXorf65A6NEN9 183 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 CRLF1O75462 422 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 SCGB2A1O75556 95 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 IGHG2P01859 326 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 RHOGP84095 191 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 ADIRFQ15847 76 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 DEFB112Q30KQ8 113 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 NECAP1Q8NC96 275 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 ISOC2Q96AB3 205 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 RNF125Q96EQ8 232 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 SLC25A39Q9BZJ4 359 aaPredicted RBP9.27□□□□□ -0.93
TRIM40-205ENST00000307859 CTDSP1Q9GZU7 261 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 TMEM14CQ9P0S9 112 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 PRELID1Q9Y255 219 aa9.27□□□□□ -0.93
TRIM40-205ENST00000307859 TRBV20OR9-2A0A075B6H5 130 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 H3BRN7 92 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 BRI3O95415 125 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 CTSGP08311 255 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 C15orf32Q32M92 178 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 RNF212Q495C1 297 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 LINC01551Q86U37 167 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 BCL6BQ8N143 479 aaPredicted RBP9.26□□□□□ -0.93
TRIM40-205ENST00000307859 C2CD4CQ8TF44 421 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 SHANK2-AS3Q9BTD1 123 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 ZANQ9Y493 2812 aa9.26□□□□□ -0.93
TRIM40-205ENST00000307859 OR2T8A6NH00 312 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 C9JCJ5 164 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 IGHV3-23P01764 117 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 MT-ND4LP03901 98 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 IL4P05112 153 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 FOLR2P14207 255 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 MYCNOSP40205 109 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 Q8WTZ3 238 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 ZNF414Q96IQ9 312 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 TCEAL7Q9BRU2 100 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 ELOVL1Q9BW60 279 aa9.25□□□□□ -0.93
TRIM40-205ENST00000307859 GAR1Q9NY12 217 aaKnown RBP9.25□□□□□ -0.93
TRIM40-205ENST00000307859 CLDN34H7C241 214 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 ATF4P18848 351 aaPredicted RBP9.24□□□□□ -0.93
TRIM40-205ENST00000307859 CRYBB3P26998 211 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 ADMP35318 185 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 RPL35P42766 123 aaKnown RBP9.24□□□□□ -0.93
TRIM40-205ENST00000307859 SUMO1P63165 101 aaKnown RBP9.24□□□□□ -0.93
TRIM40-205ENST00000307859 USF2Q15853 346 aaPredicted RBP9.24□□□□□ -0.93
TRIM40-205ENST00000307859 LEMD1Q68G75 181 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 CYB5R2Q6BCY4 276 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 ZNF329Q86UD4 541 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 CCDC140Q96MF4 163 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 ATP6V0BQ99437 205 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 ZNF580Q9UK33 172 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 LY96Q9Y6Y9 160 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 SVEP1Q4LDE5 3571 aa9.24□□□□□ -0.93
TRIM40-205ENST00000307859 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 H3BUA1 57 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 IGHV4-59P01825 116 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 NBEAP1P0C6P0 100 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 IER3P46695 156 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 ELOBQ15370 118 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 C9orf152Q5JTZ5 239 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 ZNF600Q6ZNG1 722 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 S100A7AQ86SG5 101 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 OR5R1Q8NH85 324 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 EEF1AKMT3Q96AZ1 226 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 CHRDL1Q9BU40 450 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 TRBV7-1A0A0A6YYK4 115 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 MRPS12O15235 138 aaKnown RBP9.23□□□□□ -0.93
TRIM40-205ENST00000307859 CRYBA1P05813 215 aa9.23□□□□□ -0.93
TRIM40-205ENST00000307859 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
TRIM40-205ENST00000307859 PPIFP30405 207 aaKnown RBP9.23□□□□□ -0.93
TRIM40-205ENST00000307859 GPR183P32249 361 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms