RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 SRSF7Q16629 238 aaKnown RBP eCLIP11□□□□□ -0.65
AFF1-201ENST00000307808 C18orf12Q96KH6 178 aa11□□□□□ -0.65
AFF1-201ENST00000307808 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
AFF1-201ENST00000307808 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
AFF1-201ENST00000307808 SAA2-SAA4A0A096LPE2 208 aa11□□□□□ -0.65
AFF1-201ENST00000307808 PRR19A6NJB7 356 aa11□□□□□ -0.65
AFF1-201ENST00000307808 SAA2P0DJI9 122 aaPredicted RBP11□□□□□ -0.65
AFF1-201ENST00000307808 SOCS3O14543 225 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 PAX8Q06710 450 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 TPTE2P1Q5T6R2 138 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 IFITM1P13164 125 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 RPL36AP83881 106 aaKnown RBP10.99□□□□□ -0.65
AFF1-201ENST00000307808 ZXDCQ2QGD7 858 aaPredicted RBP10.99□□□□□ -0.65
AFF1-201ENST00000307808 STPG1Q5TH74 334 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 SPSB3Q6PJ21 355 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 RPL36ALQ969Q0 106 aaKnown RBP10.99□□□□□ -0.65
AFF1-201ENST00000307808 COX6A1P12074 109 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 MIR17HGQ75NE6 70 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 IGKV1-8A0A0C4DH67 115 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 TRACP01848 142 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 LOC105371267A0A1B0GV96 52 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 UMODP07911 640 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 EFNB3Q15768 340 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 ZIC3O60481 467 aa10.99□□□□□ -0.65
AFF1-201ENST00000307808 ACTL10Q5JWF8 245 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 ATXN7O15265 892 aaPredicted RBP10.98□□□□□ -0.65
AFF1-201ENST00000307808 MUC6Q6W4X9 2439 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 ATP5G3P48201 142 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 IGHV3-35A0A0C4DH35 117 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 MRPL27Q9P0M9 148 aaKnown RBP10.98□□□□□ -0.65
AFF1-201ENST00000307808 TRBV24-1A0A075B6N3 115 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 IGHV3OR16-13A0A075B7E8 117 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 IGHV3-74A0A0B4J1X5 117 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 PROB1E7EW31 1015 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 EGR2P11161 476 aaPredicted RBP10.98□□□□□ -0.65
AFF1-201ENST00000307808 CEACAM8P31997 349 aaPredicted RBP10.98□□□□□ -0.65
AFF1-201ENST00000307808 GUSBP1Q15486 140 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 SRXN1Q9BYN0 137 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 RAMP3O60896 148 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 IGHV3-23P01764 117 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 C1orf194Q5T5A4 169 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 TEX38Q6PEX7 206 aa10.98□□□□□ -0.65
AFF1-201ENST00000307808 CCL1P22362 96 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 ZNF525Q8N782 197 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 RTBDNQ9BSG5 229 aaPredicted RBP10.97□□□□□ -0.65
AFF1-201ENST00000307808 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 PRTN3P24158 256 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 MUC21A0A0G2JKD1 596 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 MUC21A0A140T8X8 626 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 LINC00271P0C7V0 271 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 MUC21Q5SSG8 566 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 F8W1H4 67 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 C9orf50Q5SZB4 431 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 SLC25A28Q96A46 364 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 MRPS18CQ9Y3D5 142 aaKnown RBP10.97□□□□□ -0.65
AFF1-201ENST00000307808 D6R8Y8 96 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 TMEM133Q9H2Q1 129 aa10.97□□□□□ -0.65
AFF1-201ENST00000307808 IGHV3-64A0A075B6Q5 118 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 COLCA1Q6ZS62 124 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 AGMATQ9BSE5 352 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 F8VVB4 439 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 F8VWA3 439 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 PRCDQ00LT1 54 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 LINC00477Q96M19 166 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 NEUROG3Q9Y4Z2 214 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 IL18BPO95998 194 aa10.96□□□□□ -0.65
AFF1-201ENST00000307808 WISP3O95389 354 aaPredicted RBP10.96□□□□□ -0.65
AFF1-201ENST00000307808 CD300EQ496F6 205 aaPredicted RBP10.96□□□□□ -0.66
AFF1-201ENST00000307808 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.66
AFF1-201ENST00000307808 GFRA4Q9GZZ7 299 aa10.96□□□□□ -0.66
AFF1-201ENST00000307808 C17orf98A8MV24 154 aa10.96□□□□□ -0.66
AFF1-201ENST00000307808 PSG8Q9UQ74 426 aa10.96□□□□□ -0.66
AFF1-201ENST00000307808 A0A0G2JK05 382 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 C7orf69Q9H7B7 122 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 SLC22A18ASQ8N1D0 253 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 PLAC1Q9HBJ0 212 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 IGFBP3P17936 291 aaPredicted RBP10.95□□□□□ -0.66
AFF1-201ENST00000307808 UTF1Q5T230 341 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 WFDC6Q9BQY6 131 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 RPP25Q9BUL9 199 aaKnown RBP10.95□□□□□ -0.66
AFF1-201ENST00000307808 TRBV6-7A0A0A0MS04 114 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 IGHV2OR16-5A0A0B4J2B6 119 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 CENPVL1A0A0U1RR11 272 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 TRGV9Q99603 122 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 PDE6HQ13956 83 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 RCHY1Q96PM5 261 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 HIST3H2BBQ8N257 126 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 CTHRC1Q96CG8 243 aa10.95□□□□□ -0.66
AFF1-201ENST00000307808 PCOLCEQ15113 449 aa10.94□□□□□ -0.66
AFF1-201ENST00000307808 GNG5P63218 68 aa10.94□□□□□ -0.66
AFF1-201ENST00000307808 SYS1-DBNDD2H3BUS1 97 aa10.94□□□□□ -0.66
AFF1-201ENST00000307808 LRP4O75096 1905 aa10.94□□□□□ -0.66
AFF1-201ENST00000307808 MPZP25189 248 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms