RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 Q6ZVH6 145 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 C1orf159Q96HA4 380 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 COL18A1P39060 1754 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 C5orf67F2Z3F1 127 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 UCP1P25874 307 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 GAGE2BQ13066 116 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 JPT2Q9H910 190 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 IGHV1-18A0A0C4DH31 117 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 THADAQ6YHU6 1953 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 A0A087WWC5 75 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 TEX38Q6PEX7 206 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 POLEQ07864 2286 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 COLCA2A8K830 154 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 TMEM105Q8N8V8 129 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 IGKV1-12A0A0C4DH73 117 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 K7ERJ3 54 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 IGKV1D-12P01611 117 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 ZNF114Q8NC26 417 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 PLXND1Q9Y4D7 1925 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 GBF1Q92538 1859 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A10PA6NDY2 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A18PA6NE21 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A16PA6NEW6 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A20PA6NIJ5 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A8PA6NJQ4 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A7PA6NKC0 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A22PA8MWA6 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A12PA8MX19 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A5PA8MXJ8 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A23PA8MXZ1 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 DKK1O94907 266 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A15PP0C7V4 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A13PP0C7W8 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A14PP0C7W9 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 FAM90A24PP0C7X0 464 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 WBP1Q96G27 269 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 SFXN3Q9BWM7 321 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
USP38-201ENST00000307017 KLK9Q9UKQ9 250 aa10.4□□□□□ -0.74
USP38-201ENST00000307017 IGFBP3P17936 291 aaPredicted RBP10.4□□□□□ -0.74
USP38-201ENST00000307017 CEACAM8P31997 349 aaPredicted RBP10.4□□□□□ -0.74
USP38-201ENST00000307017 C1QTNF5Q9BXJ0 243 aa10.4□□□□□ -0.74
USP38-201ENST00000307017 SRRM4A7MD48 611 aaKnown RBP10.4□□□□□ -0.74
USP38-201ENST00000307017 MORN5Q5VZ52 161 aa10.4□□□□□ -0.74
USP38-201ENST00000307017 C15orf32Q32M92 178 aa10.4□□□□□ -0.74
USP38-201ENST00000307017 PYY3Q5JQD4 70 aa10.4□□□□□ -0.74
USP38-201ENST00000307017 MS4A6AQ9H2W1 248 aa10.4□□□□□ -0.74
USP38-201ENST00000307017 C3orf79P0CE67 100 aa10.4□□□□□ -0.75
USP38-201ENST00000307017 TMEM133Q9H2Q1 129 aa10.4□□□□□ -0.75
USP38-201ENST00000307017 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 TMEM213A2RRL7 107 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 FAM90A2PQ658T7 463 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 RUSC1-AS1Q66K80 236 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 TREML4Q6UXN2 200 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 DEFB130BP0DP73 79 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 DEFB130AP0DP74 79 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 PAX8Q06710 450 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 TMEM200BQ69YZ2 307 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 F8WEM9 126 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 PFN2P35080 140 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 CFHR2P36980 270 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 ZC2HC1AQ96GY0 325 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 C17orf100A8MU93 164 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 VWC2LB2RUY7 222 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 NDUFA2O43678 99 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 OSR1Q8TAX0 266 aaPredicted RBP10.39□□□□□ -0.75
USP38-201ENST00000307017 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
USP38-201ENST00000307017 KLF2Q9Y5W3 355 aaPredicted RBP10.39□□□□□ -0.75
USP38-201ENST00000307017 UBR3Q6ZT12 1888 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 EFNA2O43921 213 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 GAGE1Q13065 139 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 IFNL4K9M1U5 179 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 DLEU1O43261 78 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 NPSP0C0P6 89 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 IGHV4-4A0A075B6R2 117 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 TRBV6-7A0A0A0MS04 114 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 HELZP42694 1942 aaKnown RBP10.38□□□□□ -0.75
USP38-201ENST00000307017 PLNP26678 52 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 C3orf56Q8N813 242 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 ZIC4Q8N9L1 334 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 MSRB2Q9Y3D2 182 aa10.38□□□□□ -0.75
USP38-201ENST00000307017 NTF4P34130 210 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 CYTL1Q9NRR1 136 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 TET1Q8NFU7 2136 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 SDK2Q58EX2 2172 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 TNFSF13O75888 250 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 SYNJ2BPP57105 145 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
USP38-201ENST00000307017 TRAV25A0A0B4J276 109 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 PAX1P15863 534 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 ADCYAP1P18509 176 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 LYPD2Q6UXB3 125 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 C8orf46Q8TAG6 207 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
USP38-201ENST00000307017 RSPO3Q9BXY4 272 aaPredicted RBP10.37□□□□□ -0.75
USP38-201ENST00000307017 BRCA1P38398 1863 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms