RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LINC00477Q96M19 166 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 TFF1P04155 84 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 SELLP14151 372 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 TIMP3P35625 211 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 ANXA2RQ3ZCQ2 193 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 SPSB3Q6PJ21 355 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 SLC25A39Q9BZJ4 359 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-201ENST00000302528 A0A087WWL8 130 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 IGKV1D-43A0A0B4J1Z2 117 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 SH2D1AO60880 128 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 LINC00271P0C7V0 271 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 IGLV3-21P80748 117 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-201ENST00000302528 KLF5Q13887 457 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-201ENST00000302528 ZNF497Q6ZNH5 498 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 KLHL30-AS1Q8NEE0 82 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 ZNF319Q9P2F9 582 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 hADV29S1A0JD25 119 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 SMIM10L1P0DMW3 83 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 ZC2HC1BQ5TFG8 222 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 ADAMTSL5Q6ZMM2 481 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 LCNL1Q6ZST4 164 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 SMIM10Q96HG1 83 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 PIP4P2Q8N4L2 257 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 THAP8Q8NA92 274 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 TMEM190Q8WZ59 177 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 WDR83OSQ9Y284 106 aa8.56□□□□□ -1.04
CLIP1-201ENST00000302528 PFN2P35080 140 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 TAL2Q16559 108 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 VMO1Q7Z5L0 202 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 FAM90A9PA6NNJ1 464 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 RGPD3A6NKT7 1758 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-201ENST00000302528 RGPD4Q7Z3J3 1758 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 F5H768 121 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 MPV17L2Q567V2 206 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 HEATR5BQ9P2D3 2071 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 PARP14Q460N5 1801 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 A0A0G2JMM0 328 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 A0A1W2PPB8 328 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 KIR3DP1A8MWS1 328 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 PSG3Q16557 428 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 Q8TAT8 98 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 SRSF3P84103 164 aaKnown RBP8.55□□□□□ -1.04
CLIP1-201ENST00000302528 WBP1Q96G27 269 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 LIME1Q9H400 295 aa8.55□□□□□ -1.04
CLIP1-201ENST00000302528 CRLF1O75462 422 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 A0A1B0GWJ7 208 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 BMPERQ8N8U9 685 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-201ENST00000302528 TRBV7-1A0A0A6YYK4 115 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 IGHV2-26A0A0B4J1V2 119 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 H3BUX3 64 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 GREM1O60565 184 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 TRACP01848 142 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 C10orf55Q5SWW7 151 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 DSCR8Q96T75 97 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 SMIM2Q9BVW6 85 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 TRAV12-1A0A0B4J245 112 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 DLEU1O43261 78 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 TCF15Q12870 199 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 ZNF837Q96EG3 531 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-201ENST00000302528 VSIRQ9H7M9 311 aa8.54□□□□□ -1.04
CLIP1-201ENST00000302528 AMBPP02760 352 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 TMEM258P61165 79 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 TREML4Q6UXN2 200 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 DOPEY2Q9Y3R5 2298 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 UBE2CO00762 179 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 DAD1P61803 113 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 HEPN1Q6WQI6 88 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 RNF126Q9BV68 326 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 SPATA31B1PQ5VZV4 182 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 LCN12Q6JVE5 192 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 SCRT2Q9NQ03 307 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 ATG2BQ96BY7 2078 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 AHCTF1Q8WYP5 2266 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 DIDO1Q9BTC0 2240 aaKnown RBP8.53□□□□□ -1.04
CLIP1-201ENST00000302528 SPTA1P02549 2419 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 GAGE1Q13065 139 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 GAGE4Q13068 117 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 GAGE5Q13069 117 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 MSRB2Q9Y3D2 182 aa8.53□□□□□ -1.04
CLIP1-201ENST00000302528 KLRD1Q13241 179 aa8.52□□□□□ -1.04
CLIP1-201ENST00000302528 TRPT1Q86TN4 253 aaKnown RBP8.52□□□□□ -1.04
CLIP1-201ENST00000302528 PAPPA2Q9BXP8 1791 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 B4DSR2 109 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 NXPH4O95158 308 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 ZNF672Q499Z4 452 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-201ENST00000302528 ZNF362Q5T0B9 420 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-201ENST00000302528 PLXNB2O15031 1838 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 RTTNQ86VV8 2226 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 SYS1-DBNDD2H3BUS1 97 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 C1orf194Q5T5A4 169 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 BRD3OSQ6XYD6 125 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
CLIP1-201ENST00000302528 GAGE12BA1L429 117 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms