RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 SSBP4Q9BWG4 385 aaPredicted RBP10.9□□□□□ -0.66
NCSTN-201ENST00000294785 PSG1P11464 419 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 RPEQ96AT9 228 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 LPAR2Q9HBW0 351 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 I3L2K1 104 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 DLEU1O43261 78 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 HOXB4P17483 251 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-201ENST00000294785 G0S2P27469 103 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 TCF24Q7RTU0 167 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 Q86TA4 180 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 RASL11BQ9BPW5 248 aa10.89□□□□□ -0.67
NCSTN-201ENST00000294785 SLC25A39Q9BZJ4 359 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-201ENST00000294785 RNASEKQ6P5S7 137 aaKnown RBP10.88□□□□□ -0.67
NCSTN-201ENST00000294785 LINC00322Q6ZN03 302 aaPredicted RBP10.88□□□□□ -0.67
NCSTN-201ENST00000294785 GTSF1Q8WW33 167 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 CHCHD1Q96BP2 118 aaKnown RBP10.88□□□□□ -0.67
NCSTN-201ENST00000294785 TMEM208Q9BTX3 173 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 GPR6P46095 362 aaPredicted RBP10.88□□□□□ -0.67
NCSTN-201ENST00000294785 LYZP61626 148 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 TCF15Q12870 199 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 SGK494Q96LW2 274 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 TXN2Q99757 166 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 PLXNB1O43157 2135 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 ZNF292O60281 2723 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 PPIAL4CA0A0B4J2A2 164 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 PPIAL4GP0DN37 164 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 VKORC1Q9BQB6 163 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 WNT10AQ9GZT5 417 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 FBXL15Q9H469 300 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 MALRD1Q5VYJ5 2156 aa10.88□□□□□ -0.67
NCSTN-201ENST00000294785 RIF1Q5UIP0 2472 aaKnown RBP10.88□□□□□ -0.67
NCSTN-201ENST00000294785 IGHV3-21A0A0B4J1V1 117 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 C2orf70A6NJV1 201 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 LY6LH3BQJ8 138 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 APELAP0DMC3 54 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 HNRNPA3P51991 378 aaKnown RBP10.87□□□□□ -0.67
NCSTN-201ENST00000294785 LEMD1Q68G75 181 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 C1RLQ9NZP8 487 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 BSNQ9UPA5 3926 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 TRAV9-2A0A087WT02 112 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.87□□□□□ -0.67
NCSTN-201ENST00000294785 EBLN2Q6P2I7 272 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 C16orf54Q6UWD8 224 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 Q6ZN92 141 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 LYPD1Q8N2G4 141 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 SCNM1Q9BWG6 230 aa10.87□□□□□ -0.67
NCSTN-201ENST00000294785 COL8A1P27658 744 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 FOXA3P55318 350 aaPredicted RBP10.86□□□□□ -0.67
NCSTN-201ENST00000294785 NDFIP1Q9BT67 221 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 SMG1Q96Q15 3661 aaKnown RBP10.86□□□□□ -0.67
NCSTN-201ENST00000294785 MGAQ8IWI9 3026 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 CRXO43186 299 aaPredicted RBP10.86□□□□□ -0.67
NCSTN-201ENST00000294785 PLGLAQ15195 96 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 BATFQ16520 125 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 LHFPL4Q7Z7J7 247 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 BPIFA4PQ86YQ2 179 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 TMEM75Q8N9X5 138 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 PGLYRP4Q96LB8 373 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 TMEM70Q9BUB7 260 aa10.86□□□□□ -0.67
NCSTN-201ENST00000294785 MRPS16Q9Y3D3 137 aaKnown RBP10.86□□□□□ -0.67
NCSTN-201ENST00000294785 HAX1O00165 279 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 IGLV2-11P01706 119 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 URB1-AS1Q96HZ7 61 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 GSX1Q9H4S2 264 aaPredicted RBP10.85□□□□□ -0.67
NCSTN-201ENST00000294785 LAMTOR2Q9Y2Q5 125 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 GOLT1BQ9Y3E0 138 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 LAMA5O15230 3695 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 S100A7AQ86SG5 101 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 SHANK2-AS3Q9BTD1 123 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 ZFP30Q9Y2G7 519 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 A6NNC1 897 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 K7EQM0 130 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 CHEK1O14757 476 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 IGKV1-17P01599 117 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 LINC00614P0C842 121 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 COX7A1P24310 79 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 MUC15Q8N387 334 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 OR4F17Q8NGA8 305 aa10.85□□□□□ -0.67
NCSTN-201ENST00000294785 CEP250Q9BV73 2442 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 TRBV19A0A075B6N1 114 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 LOC102724200A0A096LPH7 203 aaPredicted RBP10.84□□□□□ -0.67
NCSTN-201ENST00000294785 H3BRN7 92 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 H3BTX0 84 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 LIPFP07098 398 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 LY6G5BQ8NDX9 201 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 AKAP13Q12802 2813 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 ROS1P08922 2347 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 K7EIM0 57 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 CNIH1O95406 144 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 OR5AL1P0C617 328 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 DLX1P56177 255 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 Q56UQ5 140 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 LCN12Q6JVE5 192 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
NCSTN-201ENST00000294785 PTPRZ1P23471 2315 aaPredicted RBP10.83□□□□□ -0.68
NCSTN-201ENST00000294785 ANKRD11Q6UB99 2663 aaPredicted RBP10.83□□□□□ -0.68
NCSTN-201ENST00000294785 APOHP02749 345 aaPredicted RBP10.83□□□□□ -0.68
NCSTN-201ENST00000294785 TSPOP30536 169 aa10.83□□□□□ -0.68
NCSTN-201ENST00000294785 FAM120AOSQ5T036 256 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms