RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 CLPSP04118 112 aa12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 ZFHX2Q9C0A1 2572 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 UBE2E1P51965 193 aa12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 RNF5Q99942 180 aa12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 MPTX1A8MV57 137 aa12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 PLXNA1Q9UIW2 1896 aa12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 IFT22Q9H7X7 185 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 ZNF561-AS1K7EIQ3 104 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 PAX2Q02962 417 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 H0YJW9 148 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 PKIAP61925 76 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 ERCC8Q13216 396 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 TTC32Q5I0X7 151 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 Q8TAT8 98 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 ST6GALNAC6Q969X2 333 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 GATD1Q8NB37 220 aa12.06□□□□□ -0.48
TRAPPC8-201ENST00000283351 IGKV1-12A0A0C4DH73 117 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 IGKV1D-12P01611 117 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 SSBP2P81877 361 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 SIGLEC9Q9Y336 463 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 SS18Q15532 418 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 COQ2Q96H96 371 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 NRXN2Q9P2S2 1712 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 TRAV9-2A0A087WT02 112 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 A0A087WV48 116 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 ZNF138P52744 262 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.05□□□□□ -0.489e-7■■■■□ 20.5
TRAPPC8-201ENST00000283351 CCL1P22362 96 aa12.05□□□□□ -0.48
TRAPPC8-201ENST00000283351 FER1L5A0AVI2 2057 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 LINC00614P0C842 121 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 J3QLI3 93 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 PAX9P55771 341 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 PMCHL2Q9BQD1 86 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 CD300EQ496F6 205 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 TYMSP04818 313 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 CSRP3P50461 194 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 PLA2G2CQ5R387 149 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 PUSL1Q8N0Z8 303 aaKnown RBP12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 A0A087WWL8 130 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 NMBP08949 121 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE1Q13065 139 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE4Q13068 117 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE5Q13069 117 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 FAM19A2Q8N3H0 131 aa12.04□□□□□ -0.48
TRAPPC8-201ENST00000283351 IGKV1D-17A0A075B6S4 117 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 A0A096LPF7 62 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 IGHV2-70DA0A0C4DH43 119 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE12BA1L429 117 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 ZNF98A6NK75 572 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE7O76087 117 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE12FP0CL80 117 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE12GP0CL81 117 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 GAGE12IP0CL82 117 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 GZMBP10144 247 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 HGFACQ04756 655 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 TRAV3A0A0B4J244 114 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 G3V318 75 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 LSM4Q9Y4Z0 139 aaKnown RBP12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 IGFBP3P17936 291 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 PLNP26678 52 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 EFNB3Q15768 340 aa12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
TRAPPC8-201ENST00000283351 F2Z2F3 143 aa12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 DEFB113Q30KQ7 82 aa12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 CHTOPQ9Y3Y2 248 aaKnown RBP12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 SCN5AQ14524 2016 aa12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 F8VVB4 439 aa12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 F8VWA3 439 aa12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 Q5BKY6 102 aa12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 GLRX5Q86SX6 157 aa12.02□□□□□ -0.48
TRAPPC8-201ENST00000283351 GGTLC3B5MD39 225 aa12.02□□□□□ -0.49
TRAPPC8-201ENST00000283351 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
TRAPPC8-201ENST00000283351 SPINK13Q1W4C9 94 aa12.02□□□□□ -0.49
TRAPPC8-201ENST00000283351 TCTEX1D4Q5JR98 221 aa12.02□□□□□ -0.49
TRAPPC8-201ENST00000283351 K7ERU9 68 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 CFHR2P36980 270 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 IGFL3Q6UXB1 125 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 NCR2O95944 276 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 LAMTOR3Q9UHA4 124 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 SHISA3A0PJX4 238 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 C14orf178Q8N769 122 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 ZNRD1Q9P1U0 126 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 TEX43Q6ZNM6 134 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 DKK1O94907 266 aa12.01□□□□□ -0.49
TRAPPC8-201ENST00000283351 B3GALT5-AS1P59052 145 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1970.7 ms