RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 UBL5Q9BZL1 73 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 ACACBO00763 2458 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 PRR14LQ5THK1 2151 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 TANC2Q9HCD6 1990 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 PRCDQ00LT1 54 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 C3orf36Q3SXR2 165 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 SPSB3Q6PJ21 355 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 TIMP3P35625 211 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 SRRM4A7MD48 611 aaKnown RBP7.27□□□□□ -1.25
NIPBL-201ENST00000282516 SLC22A18ASQ8N1D0 253 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 C1QTNF5Q9BXJ0 243 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 YPEL1O60688 119 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 YPEL2Q96QA6 119 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 WFDC6Q9BQY6 131 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 A6NNC1 897 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 UTF1Q5T230 341 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 PRIMA1Q86XR5 153 aa7.27□□□□□ -1.25
NIPBL-201ENST00000282516 RTBDNQ9BSG5 229 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-201ENST00000282516 MAJINQ3KP22 176 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 ITGBL1O95965 494 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-201ENST00000282516 C15orf32Q32M92 178 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 LOC101059948A0A1B0GTJ6 334 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 RAMP3O60896 148 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 GATA2P23769 480 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-201ENST00000282516 DSCR9P59020 149 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 METRNQ9UJH8 293 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 TCF20Q9UGU0 1960 aaKnown RBP7.26□□□□□ -1.25
NIPBL-201ENST00000282516 TRAV41A0A0B4J266 112 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 hADV29S1A0JD25 119 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 TBX6O95947 436 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-201ENST00000282516 TCRAP04437 139 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 LSM4Q9Y4Z0 139 aaKnown RBP7.26□□□□□ -1.25
NIPBL-201ENST00000282516 IGHV3-73A0A0B4J1V6 119 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 THAP8Q8NA92 274 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 LY6G5BQ8NDX9 201 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 C5orf67F2Z3F1 127 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 IGHG3P01860 377 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 Q5BKY6 102 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 SLC25A28Q96A46 364 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 A0A1W2PQF6 199 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 LHX2P50458 406 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 ZNF497Q6ZNH5 498 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 PYYP10082 97 aa7.26□□□□□ -1.25
NIPBL-201ENST00000282516 C1QL4Q86Z23 238 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 DSCR8Q96T75 97 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 CRIM1Q9NZV1 1036 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 TRBV20-1A0A075B6N2 111 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 A0A0G2JK05 382 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 EFNB3Q15768 340 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 PPDPFLQ8WWR9 84 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 NHSL1Q5SYE7 1610 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 TRBV7-1A0A0A6YYK4 115 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 THBDP07204 575 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 C9JAW5 83 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 TRBV6-7A0A0A0MS04 114 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 TRAV1-1A0A0B4J248 108 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 NPIPB5A8MRT5 1133 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 PLAC1Q9HBJ0 212 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 CD160O95971 181 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 LINC00271P0C7V0 271 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 CD33P20138 364 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 HIST3H2BBQ8N257 126 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 TRGV9Q99603 122 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 IGKV2-40A0A087WW87 121 aaPredicted RBP7.25□□□□□ -1.25
NIPBL-201ENST00000282516 C17orf100A8MU93 164 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 PIN1P1O15428 100 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 MMP23AO75900 390 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 IGKV2D-40P01614 121 aaPredicted RBP7.25□□□□□ -1.25
NIPBL-201ENST00000282516 OR9G9P0C7N8 305 aa7.25□□□□□ -1.25
NIPBL-201ENST00000282516 ACTL10Q5JWF8 245 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 FDCSPQ8NFU4 85 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 LTBRP36941 435 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 IFITM1P13164 125 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 MPZP25189 248 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 PKIGQ9Y2B9 76 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 PSG1P11464 419 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 ZNF876PQ49A33 203 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 TNFRSF14Q92956 283 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 HCFC1P51610 2035 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 DSCAML1Q8TD84 2053 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 UBE2V1Q13404 147 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 ZNF474Q6S9Z5 364 aaPredicted RBP7.24□□□□□ -1.25
NIPBL-201ENST00000282516 SAP25Q8TEE9 199 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 RMI2Q96E14 147 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 MBNL3Q9NUK0 354 aaKnown RBP7.24□□□□□ -1.25
NIPBL-201ENST00000282516 GLI3P10071 1580 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 RNF114Q9Y508 228 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 A0A087X0K7 114 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 CRLF1O75462 422 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 AMBPP02760 352 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 NABP1Q96AH0 204 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 LOC105371267A0A1B0GV96 52 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 GAGE12BA1L429 117 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 SRD5A1P18405 259 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 ZNF138P52744 262 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 PMVKQ15126 192 aa7.24□□□□□ -1.25
NIPBL-201ENST00000282516 RNASE6Q93091 150 aaKnown RBP7.24□□□□□ -1.25
NIPBL-201ENST00000282516 A0A1B0GW64 132 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms