RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 C10orf55Q5SWW7 151 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 TOMM20LQ6UXN7 152 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 MBD3L1Q8WWY6 194 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 FAM210BQ96KR6 192 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 LINC00477Q96M19 166 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 IGHV3-21A0A0B4J1V1 117 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 DNAJC9-AS1A6NH13 148 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 RRN3P1Q2M238 152 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 THAP8Q8NA92 274 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 LY6LH3BQJ8 138 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 M0R143 59 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 IGHG4P01861 327 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
EPHA4-201ENST00000281821 NSUN5P1Q3KNT7 163 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 TCF24Q7RTU0 167 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 GBGT1Q8N5D6 347 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 OR4B1Q8NGF8 309 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 TEX48A0A1B0GUV7 120 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 H7C1H1 209 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 RIPPLY3P57055 190 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 BSXQ3C1V8 233 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 GPHB5Q86YW7 130 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 SHANK2-AS3Q9BTD1 123 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 RHPN1-AS1Q9BWJ2 59 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 SOX21Q9Y651 276 aaPredicted RBP6.18□□□□□ -1.42
EPHA4-201ENST00000281821 TRGC1P0CF51 173 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 AREGP15514 252 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 FMC1Q96HJ9 113 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 TNRC6AQ8NDV7 1962 aaKnown RBP6.17□□□□□ -1.42
EPHA4-201ENST00000281821 TRGV11A0A075B6L2 103 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 PSG1P11464 419 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 ZNF581Q9P0T4 197 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 ARHGAP21Q5T5U3 1957 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 IGLC7A0M8Q6 106 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 NMBP08949 121 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 ERVFC1-1P60608 527 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 STHQ8IWL8 128 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 TMEM14CQ9P0S9 112 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 LOC105371267A0A1B0GV96 52 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 C7orf77A4D0Y5 90 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 PAGE4O60829 102 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 MRPL53Q96EL3 112 aaKnown RBP6.17□□□□□ -1.42
EPHA4-201ENST00000281821 SMIM12Q96EX1 92 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 RCC1LQ96I51 464 aaKnown RBP6.17□□□□□ -1.42
EPHA4-201ENST00000281821 GGTLC1Q9BX51 225 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 GPX1P07203 203 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 STAG3L2P0CL84 134 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 STAG3L3P0CL85 134 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 PMS2P11Q13670 270 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 OR10G8Q8NGN5 311 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 CFHR4Q92496 578 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 TRAPPC1Q9Y5R8 145 aa6.17□□□□□ -1.42
EPHA4-201ENST00000281821 EXPH5Q8NEV8 1989 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 MT-ND6P03923 174 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 C16orf54Q6UWD8 224 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 FAM159AQ6UWV7 190 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 WFDC3Q8IUB2 231 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 TRANK1O15050 2925 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 IGLV11-55A0A075B6I3 123 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 MFSD2BA6NFX1 497 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 APOC4P55056 127 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 LENEPQ9Y5L5 61 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 PKIAP61925 76 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 HIST1H1AQ02539 215 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-201ENST00000281821 RNF152Q8N8N0 203 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 C4orf3Q8WVX3 66 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 RNF126Q9BV68 326 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 NAGKQ9UJ70 344 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 SHANK1Q9Y566 2161 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 RUNX1Q01196 453 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 OR10W1Q8NGF6 305 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 PACRGQ96M98 296 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-201ENST00000281821 ATG101Q9BSB4 218 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 ZNF25P17030 456 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-201ENST00000281821 GCSHP23434 173 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 PLP1P60201 277 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 WT1-ASQ06250 92 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 ZNF506Q5JVG8 444 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 SRCAPQ6ZRS2 3230 aa6.16□□□□□ -1.42
EPHA4-201ENST00000281821 A0A1W2PPR1 153 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 TMEM183BQ1AE95 376 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 GTF2H5Q6ZYL4 71 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 TCF23Q7RTU1 214 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 TRAV2A0A0B4J234 112 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 A0A1W2PRX2 142 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 RNF222A6NCQ9 220 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 J3QR89 54 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 OR11H1Q8NG94 326 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 ZNF502Q8TBZ5 544 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 TRAV21A0A0B4J279 112 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 CRIP2P52943 208 aaPredicted RBP6.15□□□□□ -1.42
EPHA4-201ENST00000281821 PTTG1IPP53801 180 aa6.15□□□□□ -1.42
EPHA4-201ENST00000281821 TRAV3A0A0B4J244 114 aa6.15□□□□□ -1.43
EPHA4-201ENST00000281821 ZNF329Q86UD4 541 aa6.15□□□□□ -1.43
EPHA4-201ENST00000281821 Q8N6K4 173 aa6.15□□□□□ -1.43
EPHA4-201ENST00000281821 TMEM189A5PLL7 270 aa6.15□□□□□ -1.43
EPHA4-201ENST00000281821 LINC01549A6NIU2 74 aa6.15□□□□□ -1.43
EPHA4-201ENST00000281821 IGKV1-39P01597 117 aa6.15□□□□□ -1.43
EPHA4-201ENST00000281821 IGKV1D-39P04432 117 aa6.15□□□□□ -1.43
EPHA4-201ENST00000281821 TFPI2P48307 235 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms