RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GATD1Q8NB37 220 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 MDS2Q8NDY4 140 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 C19orf67A6NJJ6 358 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 H0YJW9 148 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 TNFRSF14Q92956 283 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 DEFB130BP0DP73 79 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 DEFB130AP0DP74 79 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 HEATR1Q9H583 2144 aaKnown RBP9.72□□□□□ -0.85
SHPRH-201ENST00000275233 SAA4P35542 130 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 GGTLC1Q9BX51 225 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 NEUROG3Q9Y4Z2 214 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 CACNA1EQ15878 2313 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 INTS1Q8N201 2190 aaKnown RBP9.72□□□□□ -0.85
SHPRH-201ENST00000275233 SYNJ2BPP57105 145 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 ERCC8Q13216 396 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 Q96MF0 132 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 A0A1W2PRE2 83 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 E7EQL1 145 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 TEX38Q6PEX7 206 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 ZDBF2Q9HCK1 2354 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 A0A087WWC5 75 aa9.72□□□□□ -0.85
SHPRH-201ENST00000275233 A0A087WWL8 130 aa9.71□□□□□ -0.85
SHPRH-201ENST00000275233 D6R8Y8 96 aa9.71□□□□□ -0.85
SHPRH-201ENST00000275233 MLANAQ16655 118 aa9.71□□□□□ -0.85
SHPRH-201ENST00000275233 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.85
SHPRH-201ENST00000275233 DERL1Q9BUN8 251 aa9.71□□□□□ -0.85
SHPRH-201ENST00000275233 C5orf64Q2M2E5 130 aa9.71□□□□□ -0.85
SHPRH-201ENST00000275233 TRBV7-1A0A0A6YYK4 115 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-201ENST00000275233 SPAG8Q99932 426 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-201ENST00000275233 MED12Q93074 2177 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 AKAP6Q13023 2319 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 POLEQ07864 2286 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 LINC00473A8K010 186 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 LAGE3Q14657 143 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 ORMDL2Q53FV1 153 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 MINOS1Q5TGZ0 78 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 RPRMLQ8N4K4 120 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 OSTCQ9NRP0 149 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 MINOS1-NBL1R4GNA1 71 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 F2Z2F3 143 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 SH2D1AO60880 128 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 ID3Q02535 119 aa9.71□□□□□ -0.86
SHPRH-201ENST00000275233 SPTA1P02549 2419 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 IGKV1D-17A0A075B6S4 117 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 IL17RELQ6ZVW7 336 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 PRDM13Q9H4Q3 707 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 PNRC2Q9NPJ4 139 aaKnown RBP9.7□□□□□ -0.86
SHPRH-201ENST00000275233 LCN12Q6JVE5 192 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 SSC4DQ8WTU2 575 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 TMEM170AQ8WVE7 144 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 MYO7BQ6PIF6 2116 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 Q5PR19 223 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 A0A1B0GWJ7 208 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 JPT2Q9H910 190 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 SMKR1H3BMG3 65 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 PAX4O43316 350 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 TSKUQ8WUA8 353 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 WDR83OSQ9Y284 106 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 PI4KAP42356 2102 aa9.7□□□□□ -0.86
SHPRH-201ENST00000275233 TRAV9-1A0A075B6T8 112 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 GAS1P54826 345 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 C14orf178Q8N769 122 aaPredicted RBP9.69□□□□□ -0.86
SHPRH-201ENST00000275233 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 CACNA1DQ01668 2161 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 PHF3Q92576 2039 aaKnown RBP9.69□□□□□ -0.86
SHPRH-201ENST00000275233 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 OR2K2Q8NGT1 345 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 C1orf159Q96HA4 380 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 SIGLEC9Q9Y336 463 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 FAM90A9PA6NNJ1 464 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 A8MXK9 166 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 M0R1W7 72 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
SHPRH-201ENST00000275233 FAM110DQ8TAY7 271 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 FANCMQ8IYD8 2048 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 PLNP26678 52 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 GATA4P43694 442 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 ZNF138P52744 262 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 RHPN1-AS1Q9BWJ2 59 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 SLC25A2Q9BXI2 301 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 MSRB2Q9Y3D2 182 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 TRAV13-1A0A0B4J241 112 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 MBD3L4A6NDZ8 208 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 MBD3L3A6NE82 208 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 MBD3L5A6NJ08 208 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 M0R2P5 195 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 OVOL3O00110 214 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 Q6P435 159 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 MBD3L2Q8NHZ7 208 aaPredicted RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 NAA38Q9BRA0 125 aaKnown RBP9.68□□□□□ -0.86
SHPRH-201ENST00000275233 NTF4P34130 210 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 B3GALT5-AS1P59052 145 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 GSN-AS1Q9NRJ2 163 aa9.68□□□□□ -0.86
SHPRH-201ENST00000275233 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms