RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 H3BRN7 92 aa9.42□□□□□ -0.9
SDE2-201ENST00000272091 OR2C1O95371 312 aa9.42□□□□□ -0.9
SDE2-201ENST00000272091 MYCNOSP40205 109 aa9.42□□□□□ -0.9
SDE2-201ENST00000272091 Q6YL49 198 aa9.42□□□□□ -0.9
SDE2-201ENST00000272091 RNF125Q96EQ8 232 aa9.42□□□□□ -0.9
SDE2-201ENST00000272091 TXN2Q99757 166 aa9.42□□□□□ -0.9
SDE2-201ENST00000272091 IL4P05112 153 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 CFHR3Q02985 330 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 PITPNC1Q9UKF7 332 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 A0A1W2PRE2 83 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 M0QZK8 103 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 NECAP1Q8NC96 275 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 SHANK2-AS3Q9BTD1 123 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 ELOVL1Q9BW60 279 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 PRDM13Q9H4Q3 707 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 SMCO4Q9NRQ5 59 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 CSPG4Q6UVK1 2322 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 A0A087WWC5 75 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 PGPEP1LA6NFU8 196 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 SMAD7O15105 426 aaKnown RBP9.41□□□□□ -0.9
SDE2-201ENST00000272091 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 TMEM95Q3KNT9 176 aa9.41□□□□□ -0.9
SDE2-201ENST00000272091 ANK3Q12955 4377 aaKnown RBP9.41□□□□□ -0.9
SDE2-201ENST00000272091 MRPS12O15235 138 aaKnown RBP9.4□□□□□ -0.9
SDE2-201ENST00000272091 PNRC1Q12796 327 aaPredicted RBP9.4□□□□□ -0.9
SDE2-201ENST00000272091 ITPR2Q14571 2701 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 GPR183P32249 361 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 IL17RELQ6ZVW7 336 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 ZNF329Q86UD4 541 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 FOXC2Q99958 501 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 UNC79Q9P2D8 2635 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 C2CD4CQ8TF44 421 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 TUBA4BQ9H853 241 aa9.4□□□□□ -0.9
SDE2-201ENST00000272091 CRYBB3P26998 211 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 SUMO1P63165 101 aaKnown RBP9.39□□□□□ -0.91
SDE2-201ENST00000272091 CUBNO60494 3623 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 H3BTX0 84 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 FABP1P07148 127 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 ADIRFQ15847 76 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 ZNF600Q6ZNG1 722 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 ZNF586Q9NXT0 402 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 CLEC3BP05452 202 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 LINC01551Q86U37 167 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 AURKAIP1Q9NWT8 199 aaPredicted RBP9.39□□□□□ -0.91
SDE2-201ENST00000272091 B4DEV8 164 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 BRI3O95415 125 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 IGLV1-40P01703 118 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 RNF212Q495C1 297 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 BLNKQ8WV28 456 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 HIST1H2BAQ96A08 127 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 KLK15Q9H2R5 256 aa9.39□□□□□ -0.91
SDE2-201ENST00000272091 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 VPREB3Q9UKI3 123 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 RPL35P42766 123 aaKnown RBP9.38□□□□□ -0.91
SDE2-201ENST00000272091 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 Q8WTZ3 238 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 IGHV3OR16-8A0A075B7F1 116 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 K7EN84 100 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 HOXA3O43365 443 aaPredicted RBP9.38□□□□□ -0.91
SDE2-201ENST00000272091 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 LCNL1Q6ZST4 164 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 STXBP6Q8NFX7 210 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 EEF1AKMT3Q96AZ1 226 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 C17orf77Q96MU5 243 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 ZNF580Q9UK33 172 aa9.38□□□□□ -0.91
SDE2-201ENST00000272091 CLPSL1A2RUU4 121 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 ZNF98A6NK75 572 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 PPP5D1E7EU14 171 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 TRGV3P03979 118 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 IGLC2P0DOY2 106 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 OR5R1Q8NH85 324 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 TRBV7-1A0A0A6YYK4 115 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 AP4M1O00189 453 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 TGOLN2O43493 480 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 TRBV12-3P01733 135 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 ATP5G2Q06055 141 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
SDE2-201ENST00000272091 GNG5P63218 68 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 TOMM20LQ6UXN7 152 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 OCC1Q8TAD7 63 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 LINC00479Q96M42 142 aa9.37□□□□□ -0.91
SDE2-201ENST00000272091 FAM24BQ8N5W8 94 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 H3BUA1 57 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 TPPP2P59282 170 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 ELOBQ15370 118 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 ZNF702PQ9H963 129 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 FLNAP21333 2647 aaKnown RBP9.36□□□□□ -0.91
SDE2-201ENST00000272091 C9JCJ5 164 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 IGLV2-8P01709 118 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 CREBBPQ92793 2442 aa9.36□□□□□ -0.91
SDE2-201ENST00000272091 SLC17A3O00476 420 aa9.35□□□□□ -0.91
SDE2-201ENST00000272091 CXCL1P09341 107 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms