RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
COPS3-201ENST00000268717 PUS1Q9Y606 427 aaKnown RBP eCLIP11.99□□□□□ -0.49
COPS3-201ENST00000268717 WI2-2373I1.2A0A1W2PRP0 233 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 SH2D7A6NKC9 451 aaPredicted RBP11.98□□□□□ -0.49
COPS3-201ENST00000268717 LINC01548A6NM66 108 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 M0R036 132 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 ATP5G3P48201 142 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 UBE2G2P60604 165 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 RHOGP84095 191 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 Q56UQ5 140 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 MORN5Q5VZ52 161 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
COPS3-201ENST00000268717 UHRF2Q96PU4 802 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 PAXXQ9BUH6 204 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 OR51M1Q9H341 326 aa11.98□□□□□ -0.49
COPS3-201ENST00000268717 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
COPS3-201ENST00000268717 A0A087WWC5 75 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 C7orf77A4D0Y5 90 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 G3V318 75 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 AP4M1O00189 453 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 LYZP61626 148 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 UBE2L3P68036 154 aaKnown RBP11.97□□□□□ -0.49
COPS3-201ENST00000268717 C15orf32Q32M92 178 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 Q6YL49 198 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 Q8WTZ3 238 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 SMIM7Q9BQ49 75 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 TCEAL7Q9BRU2 100 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 PARLQ9H300 379 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 TUBA4BQ9H853 241 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 SDF2L1Q9HCN8 221 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 RNF24Q9Y225 148 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 MDFIC2A0A1B0GVS7 189 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 EEF1AKMT3Q96AZ1 226 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 RNF125Q96EQ8 232 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 TMEM14CQ9P0S9 112 aa11.97□□□□□ -0.49
COPS3-201ENST00000268717 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.5
COPS3-201ENST00000268717 IGHV4-59P01825 116 aa11.96□□□□□ -0.5
COPS3-201ENST00000268717 CTSGP08311 255 aa11.96□□□□□ -0.5
COPS3-201ENST00000268717 PPIFP30405 207 aaKnown RBP11.96□□□□□ -0.5
COPS3-201ENST00000268717 S100A7P31151 101 aa11.96□□□□□ -0.5
COPS3-201ENST00000268717 SHANK2-AS3Q9BTD1 123 aa11.96□□□□□ -0.5
COPS3-201ENST00000268717 SLC25A39Q9BZJ4 359 aaPredicted RBP11.96□□□□□ -0.5
COPS3-201ENST00000268717 VPREB3Q9UKI3 123 aa11.96□□□□□ -0.5
COPS3-201ENST00000268717 PRELID1Q9Y255 219 aa11.96□□□□□ -0.5
COPS3-201ENST00000268717 H3BRN7 92 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 NUPL2O15504 423 aaKnown RBP11.95□□□□□ -0.5
COPS3-201ENST00000268717 TCF21O43680 179 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 GP9P14770 177 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 NPPCP23582 126 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 C9orf152Q5JTZ5 239 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 TMEM158Q8WZ71 300 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 RPUSD4Q96CM3 377 aaKnown RBP11.95□□□□□ -0.5
COPS3-201ENST00000268717 FXYD5Q96DB9 178 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 STAB1Q9NY15 2570 aa11.95□□□□□ -0.5
COPS3-201ENST00000268717 IL4P05112 153 aa11.94□□□□□ -0.5
COPS3-201ENST00000268717 SRSF2Q01130 221 aaKnown RBP11.94□□□□□ -0.5
COPS3-201ENST00000268717 ZNF343Q6P1L6 599 aa11.94□□□□□ -0.5
COPS3-201ENST00000268717 OR2T8A6NH00 312 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 OR10J4P0C629 311 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 BLCAPP62952 87 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 ZNF600Q6ZNG1 722 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 CBLN2Q8IUK8 224 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 USMG5Q96IX5 58 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 C20orf24Q9BUV8 137 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 TMEM242Q9NWH2 141 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 TMEM89A2RUT3 159 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 CXorf65A6NEN9 183 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 GGTLC3B5MD39 225 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 NDUFB4O95168 129 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 PYYP10082 97 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 ADMP35318 185 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 CFHR3Q02985 330 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 KIAA0141Q14154 515 aaPredicted RBP11.93□□□□□ -0.5
COPS3-201ENST00000268717 KRTAP24-1Q3LI83 254 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 TMEM88Q6PEY1 159 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 TMEM86BQ8N661 226 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 CCDC140Q96MF4 163 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 S4R3C0 116 aa11.93□□□□□ -0.5
COPS3-201ENST00000268717 SCO2A0A1W2PP80 73 aa11.92□□□□□ -0.5
COPS3-201ENST00000268717 C9JCJ5 164 aa11.92□□□□□ -0.5
COPS3-201ENST00000268717 IGLV1-40P01703 118 aa11.92□□□□□ -0.5
COPS3-201ENST00000268717 ZNF674Q2M3X9 581 aa11.92□□□□□ -0.5
COPS3-201ENST00000268717 BPIFA4PQ86YQ2 179 aa11.92□□□□□ -0.5
COPS3-201ENST00000268717 CHRDL1Q9BU40 450 aa11.92□□□□□ -0.5
COPS3-201ENST00000268717 CTDSP1Q9GZU7 261 aa11.92□□□□□ -0.5
COPS3-201ENST00000268717 BMPR1BO00238 502 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 TSPAN4O14817 238 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 TGOLN2O43493 480 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 TRGV3P03979 118 aa11.91□□□□□ -0.5
COPS3-201ENST00000268717 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms