RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 RFNGQ9Y644 331 aa12.56□□□□□ -0.4
TIMP3-201ENST00000266085 SAA4P35542 130 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 LHFPL4Q7Z7J7 247 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 IGFL2Q6UWQ7 119 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 LINC01587Q99440 93 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 IGLV3-9A0A075B6K5 115 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 ERVK11-1P61568 191 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
TIMP3-201ENST00000266085 Q8TCH9 128 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 SCRT1Q9BWW7 348 aa12.55□□□□□ -0.4
TIMP3-201ENST00000266085 SLC25A39Q9BZJ4 359 aaPredicted RBP12.55□□□□□ -0.4
TIMP3-201ENST00000266085 A6NNC1 897 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 CIDEAO60543 219 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 LYL1P12980 280 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 SLC25A16P16260 332 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 UQCRFS1P47985 274 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 OR11H1Q8NG94 326 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 OR11H2Q8NH07 326 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 RAB37Q96AX2 223 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 SLX1AQ9BQ83 275 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 PLXNB3Q9ULL4 1909 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 ATP5LO75964 103 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 DUSP14O95147 198 aaKnown RBP12.54□□□□□ -0.4
TIMP3-201ENST00000266085 LGALS3P17931 250 aaKnown RBP12.54□□□□□ -0.4
TIMP3-201ENST00000266085 SPSB3Q6PJ21 355 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 TCF23Q7RTU1 214 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 WNK1Q9H4A3 2382 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 CD7P09564 240 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 ANAPC10Q9UM13 185 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 DMRT1Q9Y5R6 373 aa12.54□□□□□ -0.4
TIMP3-201ENST00000266085 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
TIMP3-201ENST00000266085 HOXA5P20719 270 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 CFHR2P36980 270 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 IGF2-ASQ6U949 168 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 FAM19A2Q8N3H0 131 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 TMEM170AQ8WVE7 144 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 SSBP4Q9BWG4 385 aaPredicted RBP12.53□□□□□ -0.4
TIMP3-201ENST00000266085 CENPFP49454 3210 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 CEP295Q9C0D2 2601 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 PRB4P10163 310 aaPredicted RBP12.53□□□□□ -0.4
TIMP3-201ENST00000266085 ERASQ7Z444 233 aa12.53□□□□□ -0.4
TIMP3-201ENST00000266085 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 A0A1B0GW64 132 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 FBLN7Q53RD9 439 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 SPRY4Q9C004 299 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 NCOR1P1Q9H4R4 102 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 TMEM160Q9NX00 188 aa12.52□□□□□ -0.4
TIMP3-201ENST00000266085 PSMB11A5LHX3 300 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 COX6CP09669 75 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 RPL15P61313 204 aaKnown RBP12.52□□□□□ -0.41
TIMP3-201ENST00000266085 MAPK1IP1LQ8NDC0 245 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 SERF1AO75920 110 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 ZNF329Q86UD4 541 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 TRBV24-1A0A075B6N3 115 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 CA1P00915 261 aaPredicted RBP12.52□□□□□ -0.41
TIMP3-201ENST00000266085 SRD5A1P18405 259 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
TIMP3-201ENST00000266085 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 TSKUQ8WUA8 353 aa12.52□□□□□ -0.41
TIMP3-201ENST00000266085 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 IGLV3-1P01715 115 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 MLANAQ16655 118 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 TMEM190Q8WZ59 177 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 NDUFS8O00217 210 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 BEND2Q8NDZ0 799 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 SELENOKQ9Y6D0 94 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 NCOA6Q14686 2063 aaPredicted RBP12.51□□□□□ -0.41
TIMP3-201ENST00000266085 LOC107984156A0A0G2JMH3 177 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 OVOL1O14753 267 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 LOXP28300 417 aaPredicted RBP12.51□□□□□ -0.41
TIMP3-201ENST00000266085 ARL17AQ8IVW1 177 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 SCGB3A1Q96QR1 104 aa12.51□□□□□ -0.41
TIMP3-201ENST00000266085 MSMBP08118 114 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 SUMO2P61956 95 aaKnown RBP12.5□□□□□ -0.41
TIMP3-201ENST00000266085 STHQ8IWL8 128 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 TRAV8-6A0A0B4J262 113 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 CD33P20138 364 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 LIME1Q9H400 295 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 FNDC10F2Z333 226 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 TMEM50AO95807 157 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 GRNP28799 593 aaKnown RBP12.5□□□□□ -0.41
TIMP3-201ENST00000266085 PPIFP30405 207 aaKnown RBP12.5□□□□□ -0.41
TIMP3-201ENST00000266085 DNLZQ5SXM8 178 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 CYB5R2Q6BCY4 276 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 C1QL4Q86Z23 238 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 HIVEP2P31629 2446 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 A0A1W2PPI3 338 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 H3BVH4 76 aa12.5□□□□□ -0.41
TIMP3-201ENST00000266085 H7C2G1 150 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms