RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 OR4F17Q8NGA8 305 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
ZNF541-201ENST00000263351 MUC21A0A0G2JKD1 596 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 A0A0G2JNJ9 132 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 MUC21A0A140T8X8 626 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 SNAI2O43623 268 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 BPIFB3P59826 476 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 LYZP61626 148 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 GAGE1Q13065 139 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 MUC21Q5SSG8 566 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 RBM14Q96PK6 669 aaKnown RBP13.2□□□□□ -0.3
ZNF541-201ENST00000263351 C19orf24Q9BVV8 132 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 Q9H3A6 140 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 NCOR1P1Q9H4R4 102 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 Q9UFV3 132 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 PPIAL4EA0A075B759 164 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 IGHV1-24A0A0C4DH33 117 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 PPIAL4DF5H284 164 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 KLK10O43240 276 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 PPIAL4FP0DN26 164 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 RAB9BQ9NP90 201 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 WASHC3Q9Y3C0 194 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 TMEM178BH3BS89 294 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 GP9P14770 177 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 PRNTQ86SH4 94 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
ZNF541-201ENST00000263351 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
ZNF541-201ENST00000263351 MAP1AP78559 2803 aaPredicted RBP13.18□□□□□ -0.3
ZNF541-201ENST00000263351 FXYD7P58549 80 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 THAP8Q8NA92 274 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 WIPF2Q8TF74 440 aaPredicted RBP13.18□□□□□ -0.3
ZNF541-201ENST00000263351 MLST8Q9BVC4 326 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 RPP21Q9H633 154 aaKnown RBP13.18□□□□□ -0.3
ZNF541-201ENST00000263351 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
ZNF541-201ENST00000263351 COX7A1P24310 79 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 GOLT1AQ6ZVE7 132 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 TPPP3Q9BW30 176 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 FBXL15Q9H469 300 aa13.18□□□□□ -0.3
ZNF541-201ENST00000263351 RALYQ9UKM9 306 aaKnown RBP13.18□□□□□ -0.3
ZNF541-201ENST00000263351 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
ZNF541-201ENST00000263351 OR4C46A6NHA9 309 aa13.17□□□□□ -0.3
ZNF541-201ENST00000263351 GPR82Q96P67 336 aa13.17□□□□□ -0.3
ZNF541-201ENST00000263351 P01737 135 aa13.17□□□□□ -0.3
ZNF541-201ENST00000263351 TCRAP04437 139 aa13.17□□□□□ -0.3
ZNF541-201ENST00000263351 HBBP68871 147 aa13.17□□□□□ -0.3
ZNF541-201ENST00000263351 MPV17L2Q567V2 206 aa13.17□□□□□ -0.3
ZNF541-201ENST00000263351 KLF17Q5JT82 389 aaPredicted RBP13.17□□□□□ -0.3
ZNF541-201ENST00000263351 NDUFB3O43676 98 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 FAM106CPP0CH98 169 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 PSG1P11464 419 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 FAM106AQ4KMX7 169 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 PRR30Q53SZ7 412 aaPredicted RBP13.16□□□□□ -0.3
ZNF541-201ENST00000263351 LY6HO94772 140 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 KLF5Q13887 457 aaPredicted RBP13.16□□□□□ -0.3
ZNF541-201ENST00000263351 TMEM108Q6UXF1 575 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 TEX45Q8NA69 505 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 ZNF596Q8TC21 504 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 PERPQ96FX8 193 aa13.16□□□□□ -0.3
ZNF541-201ENST00000263351 ANKHD1Q8IWZ3 2542 aaKnown RBP13.15□□□□□ -0.3
ZNF541-201ENST00000263351 IGHV2-26A0A0B4J1V2 119 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 CEACAM4O75871 244 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 OR2J3O76001 311 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 IGHV1-8P0DP01 117 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 TNFRSF1AP19438 455 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 DLX6P56179 175 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 C19orf71A6NCJ1 209 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 RBP4P02753 201 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 LINC00614P0C842 121 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 CEACAM8P31997 349 aaPredicted RBP13.15□□□□□ -0.3
ZNF541-201ENST00000263351 COX19Q49B96 90 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 LDLRAD2Q5SZI1 272 aa13.15□□□□□ -0.3
ZNF541-201ENST00000263351 M0R3E3 92 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
ZNF541-201ENST00000263351 Q6ZS92 163 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 MRPL52Q86TS9 123 aaKnown RBP13.14□□□□□ -0.31
ZNF541-201ENST00000263351 TMEM70Q9BUB7 260 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 PRSS22Q9GZN4 317 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 SPTBN1Q01082 2364 aaKnown RBP13.14□□□□□ -0.31
ZNF541-201ENST00000263351 TMSB15BA0A087X1C1 80 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 C20orf202A1L168 122 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 OVOL3O00110 214 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 LTAP01374 205 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 ARMS2P0C7Q2 107 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 COL8A1P27658 744 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.31
ZNF541-201ENST00000263351 VMA21Q3ZAQ7 101 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 TMUB1Q9BVT8 246 aa13.14□□□□□ -0.31
ZNF541-201ENST00000263351 LRRC10Q5BKY1 277 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 TMEM186Q96B77 213 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 KLF12Q9Y4X4 402 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 LOC105371242A0A075B767 164 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 C16orf97H3BN30 126 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 NCR2O95944 276 aa13.13□□□□□ -0.31
ZNF541-201ENST00000263351 CRYGCP07315 174 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms